RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 ABHD12BQ7Z5M8 362 aaPredicted RBP19.42■□□□□ 0.7
PNKP-220ENST00000627232 CDH26Q8IXH8 852 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 SLC22A24Q8N4F4 322 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 CCDC54Q8NEL0 328 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 HES7Q9BYE0 225 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 ACTR6Q9GZN1 396 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 ATG5Q9H1Y0 275 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 GPR84Q9NQS5 396 aa19.42■□□□□ 0.7
PNKP-220ENST00000627232 OR5H15A6NDH6 313 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 KLRC4-KLRK1H3BQV0 150 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 H7C417 338 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 IGLV3-1P01715 115 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 NTF4P34130 210 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 RRADP55042 308 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 SSBP1Q04837 148 aaKnown RBP19.41■□□□□ 0.7
PNKP-220ENST00000627232 CBX3Q13185 183 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 METTL17Q9H7H0 456 aaPredicted RBP19.41■□□□□ 0.7
PNKP-220ENST00000627232 NUDT15Q9NV35 164 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 TMEM38BQ9NVV0 291 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 TAS2R8Q9NYW2 309 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 ZNF319Q9P2F9 582 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 KLK11Q9UBX7 282 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 MTFP1Q9UDX5 166 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 IGKV3D-15A0A087WSY6 115 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 A0A0U1RQV5 110 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 SPAARA0A1B0GVQ0 90 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 C7orf66A4D0T2 115 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 SLC2A1P11166 492 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 ZNF708P17019 499 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 CLDN18P56856 261 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 RAB25P57735 213 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 RRAS2P62070 204 aaPredicted RBP19.41■□□□□ 0.7
PNKP-220ENST00000627232 GALK2Q01415 458 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 PLGLB1Q02325 96 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 BIVMQ86UB2 503 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 LRRC18Q8N456 261 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 ZNF775Q96BV0 537 aaPredicted RBP19.41■□□□□ 0.7
PNKP-220ENST00000627232 FBXO17Q96EF6 278 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 SCMH1Q96GD3 660 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 PGAM5Q96HS1 289 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 ZNF845Q96IR2 970 aaPredicted RBP19.41■□□□□ 0.7
PNKP-220ENST00000627232 KCNK15Q9H427 330 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 NEK6Q9HC98 313 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 SLC5A6Q9Y289 635 aa19.41■□□□□ 0.7
PNKP-220ENST00000627232 TRAV18A0A075B6X5 111 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 SULT1C2O00338 296 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 RBBP9O75884 186 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 ECH1Q13011 328 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 RAB35Q15286 201 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 BCL2A1Q16548 175 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 Q6ZSR3 168 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 COMMD2Q86X83 199 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 MEIOBQ8N635 442 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 TMEM251Q8N6I4 163 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 OR4D6Q8NGJ1 314 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 AKAP1Q92667 903 aaKnown RBP eCLIP19.4■□□□□ 0.7
PNKP-220ENST00000627232 SPTSSAQ969W0 71 aa19.4■□□□□ 0.7
PNKP-220ENST00000627232 ZNF837Q96EG3 531 aaPredicted RBP19.4■□□□□ 0.7
PNKP-220ENST00000627232 PAQR5Q9NXK6 330 aaPredicted RBP19.4■□□□□ 0.7
PNKP-220ENST00000627232 AHCTF1Q8WYP5 2266 aa19.39■□□□□ 0.7
PNKP-220ENST00000627232 TRAV6A0A075B6T7 132 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 KDM4BO94953 1096 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 BPNT1O95861 308 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 CELA3AP09093 270 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 H2AFB2P0C5Z0 115 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 PTHLHP12272 177 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 CD46P15529 392 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 MAGEA5P43359 124 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 MEOX1P50221 254 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 CCR6P51684 374 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 KCNJ8Q15842 424 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 IGF2-ASQ6U949 168 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 TCTE3Q8IZS6 198 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 OR52N4Q8NGI2 321 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 OR13C9Q8NGT0 318 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 OR14K1Q8NGZ2 314 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 OR56B4Q8NH76 319 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 CNTD2Q9H8S5 307 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 CRLF2Q9HC73 371 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 PLEK2Q9NYT0 353 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 MRPL15Q9P015 296 aaKnown RBP19.39■□□□□ 0.69
PNKP-220ENST00000627232 FBLN5Q9UBX5 448 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 RAB22AQ9UL26 194 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 N6AMT1Q9Y5N5 214 aa19.39■□□□□ 0.69
PNKP-220ENST00000627232 FAM166BA8MTA8 275 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 ALDOBP05062 364 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 PRSS3P35030 304 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 RFC3P40938 356 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 SCRN3Q0VDG4 424 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 STK11Q15831 433 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 RSPO1Q2MKA7 263 aaPredicted RBP19.38■□□□□ 0.69
PNKP-220ENST00000627232 ZFP69Q49AA0 526 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 GALNTL5Q7Z4T8 443 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 FAM71F1Q96KD3 344 aaPredicted RBP19.38■□□□□ 0.69
PNKP-220ENST00000627232 LINC00470Q9BZP3 86 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 SLC6A15Q9H2J7 730 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 ASCL3Q9NQ33 180 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 FRYLO94915 3013 aa19.38■□□□□ 0.69
PNKP-220ENST00000627232 MED13Q9UHV7 2174 aa19.37■□□□□ 0.69
PNKP-220ENST00000627232 A0A0A6YYJ9 748 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms