RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 F5H5K5 113 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 TNFRSF13BO14836 293 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 SURF4O15260 269 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 OR10H3O60404 316 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 PLATP00750 562 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 HKR1P10072 659 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 PRTN3P24158 256 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 FPR2P25090 351 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 SLC6A6P31641 620 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 PYCR1P32322 319 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 HMGA2P52926 109 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 GYS2P54840 703 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 TRAP1Q12931 704 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 PPP1R8Q12972 351 aaKnown RBP11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 ESCO2Q56NI9 601 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 ARMCX4Q5H9R4 360 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 PGAM4Q8N0Y7 254 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 CYB561A3Q8NBI2 242 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 OR4C15Q8NGM1 316 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 SLCO4A1Q96BD0 722 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 CDRT15Q96T59 188 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 ATF6BQ99941 703 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 CDADC1Q9BWV3 514 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 SSBP3Q9BWW4 388 aaPredicted RBP11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 NDEL1Q9GZM8 345 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 FAM107BQ9H098 131 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 IL1RAPQ9NPH3 570 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 VNN3Q9NY84 501 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 CTSZQ9UBR2 303 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 LRCH1Q9Y2L9 728 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
SOX2-OT-241ENST00000626948 IGHV2-70DA0A0C4DH43 119 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 TVP23AA6NH52 213 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 C22orf46C9J442 243 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 SPRY1O43609 319 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 FAM20BO75063 409 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 FSTL3O95633 263 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 FABP3P05413 133 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 RPS2P15880 293 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 ATP6V1B2P21281 511 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 CD200P41217 278 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 ZNF92Q03936 586 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 TSPAN31Q12999 210 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 KRT72Q14CN4 511 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 SLC9A3R2Q15599 337 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 HSP90B2PQ58FF3 399 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 SLC27A4Q6P1M0 643 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 PGM2L1Q6PCE3 622 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 DNM1P34Q6PK57 102 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 MUC20Q8N307 709 aaPredicted RBP11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 FITM2Q8N6M3 262 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 OR51L1Q8NGJ5 315 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 OR5L1Q8NGL2 311 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 OR2AE1Q8NHA4 323 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 Q8TCH9 128 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 UPRTQ96BW1 309 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 PITX2Q99697 317 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 NTN4Q9HB63 628 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 DDX28Q9NUL7 540 aaKnown RBP11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 MAGEL2Q9UJ55 1249 aa11.27□□□□□ -0.61
SOX2-OT-241ENST00000626948 TCRBV5S2A0A599 114 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 TMPRSS2O15393 492 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 PTBP3O95758 552 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 RENP00797 406 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 GASTP01350 101 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 LCATP04180 440 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 CLUP10909 449 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 PSMB10P40306 273 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 SRP9P49458 86 aaKnown RBP11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 PIGWQ7Z7B1 504 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 ZDHHC21Q8IVQ6 265 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 PARP8Q8N3A8 854 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 OR4Q3Q8NH05 313 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 GNPDA2Q8TDQ7 276 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 RAB40AQ8WXH6 277 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 NEIL1Q96FI4 390 aaPredicted RBP11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 NSMCE2Q96MF7 247 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 ZNF747Q9BV97 191 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 PPP1R3EQ9H7J1 279 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 UFSP2Q9NUQ7 469 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 IL20Q9NYY1 176 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 OR5V1Q9UGF6 321 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 TMCC3Q9ULS5 477 aa11.26□□□□□ -0.61
SOX2-OT-241ENST00000626948 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 KIR2DS1A0A191URI9 304 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 CD300LBA8K4G0 201 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 IFNL4K9M1U5 179 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 M0R135 149 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 KCNAB3O43448 404 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 IDH3BO43837 385 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 GYPBP06028 91 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 PPIAL4GP0DN37 164 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 CA6P23280 308 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 NOS3P29474 1203 aa11.25□□□□□ -0.61
SOX2-OT-241ENST00000626948 MAGEA2P43356 314 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms