RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 TLX2O43763 284 aaPredicted RBP11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 CD5LO43866 347 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 PRKYO43930 277 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 SELEP16581 610 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 CHN2P52757 468 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 RIN1Q13671 783 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 KRTAP27-1Q3LI81 207 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 LCN1P1Q5VSP4 162 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 DRAM2Q6UX65 266 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 COLCA1Q6ZS62 124 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 PGAP1Q75T13 922 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 TIGD4Q8IY51 512 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 TCEANCQ8N8B7 351 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 BHLHE23Q8NDY6 225 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 ST7LQ8TDW4 575 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 YIPF5Q969M3 257 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 KCNJ15Q99712 375 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 ABHD6Q9BV23 337 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 NARFLQ9H6Q4 476 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 MARCH7Q9H992 704 aa11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 NIPBLQ6KC79 2804 aaeCLIP11.89□□□□□ -0.51
PCDHGC3-208ENST00000622836 NSD1Q96L73 2696 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 LRP5LA4QPB2 252 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 ZAR1LA6NP61 321 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 M0R129 80 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 TBX1O43435 398 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 APOC1P02654 83 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 LYNP07948 512 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 H2BFMP0C1H6 154 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 SLC2A1P11166 492 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 EPHA2P29317 976 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 CRYBB2P43320 205 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 CX3CR1P49238 355 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 GZMKP49863 264 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 TMEM33P57088 247 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 GK2Q14410 553 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 TRIP10Q15642 601 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 SLX4IPQ5VYV7 408 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 CYB5R2Q6BCY4 276 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 ZNF454Q8N9F8 522 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 OR8G5Q8NG78 346 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 SPRYD4Q8WW59 207 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 CCL17Q92583 94 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 STMN2Q93045 179 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 IL4I1Q96RQ9 567 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 OSBPL10Q9BXB5 764 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 TOR3AQ9H497 397 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 TREM2Q9NZC2 230 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 DNAJC27Q9NZQ0 273 aa11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 TMEFF2Q9UIK5 374 aaPredicted RBP11.88□□□□□ -0.51
PCDHGC3-208ENST00000622836 CLDN25C9JDP6 229 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 INAFM1C9JVW0 142 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 ANXA2P07355 339 aaKnown RBP11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 ADH4P08319 380 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 MRPL3P09001 348 aaKnown RBP11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 ZNF16P17020 682 aaPredicted RBP11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 SLC2A5P22732 501 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 OTX1P32242 354 aaPredicted RBP11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 PRSS12P56730 875 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 MVKQ03426 396 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 KRTAP1-1Q07627 177 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 CDK5R2Q13319 367 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 SNAI3Q3KNW1 292 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 C12orf73Q69YU5 71 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 Q6ZR03 302 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 OR13G1Q8NGZ3 307 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 OTOSQ8NHW6 89 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 TMEM163Q8TC26 289 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 RNF133Q8WVZ7 376 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 TIMD4Q96H15 378 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 TEAD3Q99594 435 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 SP140LQ9H930 580 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 S100A14Q9HCY8 104 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 BRD7Q9NPI1 651 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 TMEM100Q9NV29 134 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 LAMP5Q9UJQ1 280 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 NF1P21359 2839 aa11.87□□□□□ -0.51
PCDHGC3-208ENST00000622836 GGT3PA6NGU5 568 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 A8MV72 311 aaPredicted RBP11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 IQCF6A8MYZ5 107 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 EI24O14681 340 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 LILRA1O75019 489 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 RP2O75695 350 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 BAG2O95816 211 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 CD55P08174 381 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 TACSTD2P09758 323 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 POLR2IP36954 125 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 RAD23AP54725 363 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 SLC3A1Q07837 685 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 GLYATL3Q5SZD4 288 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 AVPI1Q5T686 147 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 NXNL2Q5VZ03 156 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 FAM57BQ71RH2 274 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 SLC16A9Q7RTY1 509 aa11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 BCDIN3DQ7Z5W3 292 aaKnown RBP11.86□□□□□ -0.51
PCDHGC3-208ENST00000622836 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms