RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 FAHD2BQ6P2I3 314 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 DRAM2Q6UX65 266 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 HACD2Q6Y1H2 254 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 APTXQ7Z2E3 356 aaKnown RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ZFP82Q8N141 532 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 MS4A15Q8N5U1 240 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 LFNGQ8NES3 379 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 VN1R2Q8NFZ6 395 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 OR6K6Q8NGW6 343 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 OR2V1Q8NHB1 315 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ITFG1Q8TB96 612 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 CNIH3Q8TBE1 160 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ACER1Q8TDN7 264 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 CXorf40AQ8TE69 158 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 TFB1MQ8WVM0 346 aaKnown RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 NEIL2Q969S2 332 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 FAM104AQ969W3 186 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 PTH2Q96A98 100 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 SDSLQ96GA7 329 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 FAHD2AQ96GK7 314 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 SERPINB12Q96P63 405 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF184Q99676 751 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 RBBP8Q99708 897 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 EBNA1BP2Q99848 306 aaKnown RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 KLHDC3Q9BQ90 382 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 TMEM121Q9BTD3 319 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 C19orf24Q9BVV8 132 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ING2Q9H160 280 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 ASCL3Q9NQ33 180 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 BATF3Q9NR55 127 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 PAK1IP1Q9NWT1 392 aaPredicted RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 VAPAQ9P0L0 249 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 DPM3Q9P2X0 92 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 OPN4Q9UHM6 478 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 UBQLN1Q9UMX0 589 aaKnown RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 TFR2Q9UP52 801 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 RCL1Q9Y2P8 373 aaKnown RBP2.8□□□□□ -1.96
BRCA1-229ENST00000621897 DHRS7Q9Y394 339 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 OARD1Q9Y530 152 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 USH1CQ9Y6N9 552 aa2.8□□□□□ -1.96
BRCA1-229ENST00000621897 KIF24Q5T7B8 1368 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 A0A0A6YYD5 115 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 IGHV2-70DA0A0C4DH43 119 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 TRBV7-9A0A0J9YWB2 115 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 A0A1B0GVI7 797 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 C2orf74A8MZ97 194 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 C9J4A7 227 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 H0Y980 276 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 SULT1C2O00338 296 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 EI24O14681 340 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 RGS16O15492 202 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 FADS1O60427 444 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 OR7A10O76100 309 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 TCRBP04435 133 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 SERPINA5P05154 406 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CDK1P06493 297 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 THRAP10827 490 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF35P13682 527 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 HIST1H1CP16403 213 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 ABOP16442 354 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CD36P16671 472 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 ME2P23368 584 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 DDOSTP39656 456 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 LEPP41159 167 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 RBM34P42696 430 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 RANBP1P43487 201 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 YAP1P46937 504 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CYB561P49447 251 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CDK9P50750 372 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 DAP3P51398 398 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CRISP1P54107 249 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 STX4Q12846 297 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 GNMTQ14749 295 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 SF3A2Q15428 464 aaKnown RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 UBE2V2Q15819 145 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 GABRA6Q16445 453 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 BSXQ3C1V8 233 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 TMEM176BQ3YBM2 270 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CCDC153Q494R4 210 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 DCST2Q5T1A1 773 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 LPCAT4Q643R3 524 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 PNCKQ6P2M8 343 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 ZNF836Q6ZNA1 936 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CCDC121Q6ZUS5 278 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 NT5DC3Q86UY8 548 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CALHM1Q8IU99 346 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 FAM71AQ8IYT1 594 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 CMTM1Q8IZ96 169 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 RIBC1Q8N443 379 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 KIR3DL3Q8N743 410 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 ZSCAN4Q8NAM6 433 aaPredicted RBP2.79□□□□□ -1.96
BRCA1-229ENST00000621897 OR10Z1Q8NGY1 313 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 FNDC8Q8TC99 324 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 FAM172AQ8WUF8 416 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 YIPF6Q96EC8 236 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 HBEGFQ99075 208 aa2.79□□□□□ -1.96
BRCA1-229ENST00000621897 STACQ99469 402 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms