RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ANGPT4Q9Y264 503 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 WIPI2Q9Y4P8 454 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 A0A087WUJ7 227 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SLC22A23A1A5C7 686 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 MS4A18H0YCH9 400 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 MPZL2O60487 215 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 FZD7O75084 574 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 GPX5O75715 221 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 GADD45GO95257 159 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 IGHV2-5P01817 119 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 MT-ND5P03915 603 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 PATE4P0C8F1 98 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 CRYBB2P43320 205 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 EFNB1P98172 346 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ZNF45Q02386 682 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 MS4A18Q3C1V0 323 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 MIDNQ504T8 468 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 STEAP3Q658P3 488 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 COMTD1Q86VU5 262 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ZNF584Q8IVC4 421 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 C10orf53Q8N6V4 93 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 LSMEM1Q8N8F7 131 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ADPRHL1Q8NDY3 354 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SLC30A7Q8NEW0 376 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SYNPRQ8TBG9 265 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 C11orf40Q8WZ69 217 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 RAB1CQ92928 201 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SLC35B4Q969S0 331 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 TXNDC15Q96J42 360 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 OPALINQ96PE5 141 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 TSPAN32Q96QS1 320 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 C12orf10Q9HB07 376 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 POLE4Q9NR33 117 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 SLCO1C1Q9NYB5 712 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 ENOPH1Q9UHY7 261 aa6.66□□□□□ -1.34
CLK1-215ENST00000621181 IGKV1D-42A0A075B6H8 117 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 A0A075B6Q4 140 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 A0A1B0GWA3 101 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 C5orf58C9J3I9 102 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 ENTPD6O75354 484 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 FARS2O95363 451 aaKnown RBP6.65□□□□□ -1.34
CLK1-215ENST00000621181 IFNW1P05000 195 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 OR8G3PP0DMU2 310 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 DBTP11182 482 aaKnown RBP6.65□□□□□ -1.34
CLK1-215ENST00000621181 CCL2P13500 99 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 OSMP13725 252 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 ZNF250P15622 560 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 SPNP16150 400 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 PRTN3P24158 256 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 CSNK1A1P48729 337 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 ERVS71-1P61550 626 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 LCN2P80188 198 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 SLC25A30Q5SVS4 291 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 ULK3Q6PHR2 472 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 CD300LDQ6UXZ3 194 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 SKA3Q8IX90 412 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 SLC22A24Q8N4F4 322 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 PARP16Q8N5Y8 322 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 LRRC17Q8N6Y2 441 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 SCAIQ8N9R8 606 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 CCL17Q92583 94 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 SLC41A3Q96GZ6 507 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 MGLLQ99685 303 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 CDH20Q9HBT6 801 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 NKIRAS2Q9NYR9 191 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 CACNG2Q9Y698 323 aa6.65□□□□□ -1.34
CLK1-215ENST00000621181 IGLV3-9A0A075B6K5 115 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 C11orf98E9PRG8 122 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 SCG5P05408 212 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 HTR2AP28223 471 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 BIDP55957 195 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 CDC42P60953 191 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 RELBQ01201 579 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 GLO1Q04760 184 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 OCLNQ16625 522 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 TSTQ16762 297 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 TBC1D28Q2M2D7 210 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 MEDAGQ5VYS4 303 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PGBD2Q6P3X8 592 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 GDPD3Q7L5L3 318 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PXKQ7Z7A4 578 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 RBM45Q8IUH3 476 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 WDFY1Q8IWB7 410 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 STX19Q8N4C7 294 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PAQR4Q8N4S7 273 aaPredicted RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 SIGLECL1Q8N7X8 197 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 BBS10Q8TAM1 723 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 FGFBP3Q8TAT2 258 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 ZNF519Q8TB69 540 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 ST7LQ8TDW4 575 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 DVL3Q92997 716 aaPredicted RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 Q96MT0 163 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 MOGAT1Q96PD6 335 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 BCL2L14Q9BZR8 327 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 RNF121Q9H920 327 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 UNKLQ9H9P5 680 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 ZNF556Q9HAH1 456 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 SIAEQ9HAT2 523 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 MAN2C1Q9NTJ4 1040 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 CLN6Q9NWW5 311 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms