RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 A6NHS1 94 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 H3BSA7 217 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 M0R135 149 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 KALRNO60229 2985 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 GPRIN2O60269 458 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ZG16O60844 167 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 CLDN14O95500 239 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 CD36P16671 472 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 APLNRP35414 380 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 TGFBR2P37173 567 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 CX3CR1P49238 355 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 IDH3GP51553 393 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-209ENST00000620393 PSMA6P60900 246 aaKnown RBP6.96□□□□□ -1.3
CPNE3-209ENST00000620393 SLC3A1Q07837 685 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 MFGE8Q08431 387 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-209ENST00000620393 WDR38Q5JTN6 314 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ARL9Q6T311 187 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF704Q6ZNC4 412 aaPredicted RBP6.96□□□□□ -1.3
CPNE3-209ENST00000620393 COLCA1Q6ZS62 124 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ELMOD2Q8IZ81 293 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 MS4A15Q8N5U1 240 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 SLC30A7Q8NEW0 376 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 OR5AK2Q8NH90 309 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ABHD4Q8TB40 342 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 SMIM19Q96E16 107 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF799Q96GE5 643 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 WFIKKN1Q96NZ8 548 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 DOK1Q99704 481 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 PBOV1Q9GZY1 135 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 BRD7Q9NPI1 651 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 NDUFA13Q9P0J0 144 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF319Q9P2F9 582 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 NUFIP1Q9UHK0 495 aaKnown RBP6.96□□□□□ -1.3
CPNE3-209ENST00000620393 RALYQ9UKM9 306 aaKnown RBP6.96□□□□□ -1.3
CPNE3-209ENST00000620393 SLC22A13Q9Y226 551 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF281Q9Y2X9 895 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 N6AMT1Q9Y5N5 214 aa6.96□□□□□ -1.3
CPNE3-209ENST00000620393 INTS1Q8N201 2190 aaKnown RBP6.95□□□□□ -1.3
CPNE3-209ENST00000620393 IGHV1-18A0A0C4DH31 117 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 PNMA8CA0A1B0GUJ8 204 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 SMIM31A0A1B0GVY4 71 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 C5orf49A4QMS7 147 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 WIPF3A6NGB9 483 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 TMEM212A6NML5 194 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 ZFPL1O95159 310 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 LCATP04180 440 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 HLA-DPB1P04440 258 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 ISG15P05161 165 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 THBDP07204 575 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 ANXA2P07355 339 aaKnown RBP6.95□□□□□ -1.3
CPNE3-209ENST00000620393 CELA3BP08861 270 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 CECR9P0C854 216 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 SLC2A1P11166 492 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 CCL2P13500 99 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF35P13682 527 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 CCNOP22674 350 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 PSMA1P25786 263 aaKnown RBP6.95□□□□□ -1.3
CPNE3-209ENST00000620393 GABRA5P31644 462 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 CCKARP32238 428 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 CRYBB2P43320 205 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 KIR3DL2P43630 455 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 SLC6A9P48067 706 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 RPS11P62280 158 aaKnown RBP eCLIP6.95□□□□□ -1.3
CPNE3-209ENST00000620393 SORDQ00796 357 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 HGFACQ04756 655 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 TFF3Q07654 80 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 TRAM1Q15629 374 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 TBC1D28Q2M2D7 210 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 YIF1BQ5BJH7 314 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 BCL2L15Q5TBC7 163 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 TMEM244Q5VVB8 128 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 GPR107Q5VW38 600 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 UNQ9370/PRO34162Q6UXP9 181 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 GDPGP1Q6ZNW5 385 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 FAM57BQ71RH2 274 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 ANKRD13BQ86YJ7 626 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 RDH10Q8IZV5 341 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 ZNF676Q8N7Q3 588 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 OR52H1Q8NGJ2 320 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 TMEM203Q969S6 136 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 SGK3Q96BR1 496 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 PGAM5Q96HS1 289 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 PGLYRP3Q96LB9 341 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 PDCD1LG2Q9BQ51 273 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 OCSTAMPQ9BR26 566 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 FUNDC2Q9BWH2 189 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 C1QTNF5Q9BXJ0 243 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 OR10A2Q9H208 303 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 MOB1AQ9H8S9 216 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 TBCCD1Q9NVR7 557 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 NDUFB11Q9NX14 153 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 EIF3KQ9UBQ5 218 aaKnown RBP6.95□□□□□ -1.3
CPNE3-209ENST00000620393 NDRG3Q9UGV2 375 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 CEPT1Q9Y6K0 416 aa6.95□□□□□ -1.3
CPNE3-209ENST00000620393 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
CPNE3-209ENST00000620393 A0A0U1RQV5 110 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 A0A1B0GTI1 187 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 TRDV1A0A1B0GX56 115 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 C5orf63A6NC05 138 aa6.94□□□□□ -1.3
CPNE3-209ENST00000620393 M0R1B8 84 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms