RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SLC22A12Q96S37 553 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 NIPSNAP1Q9BPW8 284 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 FER1L5A0AVI2 2057 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 PDE6DO43924 150 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 SELPP16109 830 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 AOAHP28039 575 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 LTC4SQ16873 150 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 OR51H1Q8NH63 302 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 ZCCHC14Q8WYQ9 949 aaKnown RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 RAB37Q96AX2 223 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 NAT8Q9UHE5 227 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 TNS2Q63HR2 1409 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 FAM74A7A6NL05 159 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 SPINT2O43291 252 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 HLA-DRB3P79483 266 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 FAM26DQ5JW98 314 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 SLC35E4Q6ICL7 350 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 SPATA6Q9NWH7 488 aaPredicted RBP13.76□□□□□ -0.21
COL5A1-208ENST00000618395 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
COL5A1-208ENST00000618395 APBB3O95704 486 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 HTR6P50406 440 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 FAM74A3Q4VXF1 159 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 LSRQ86X29 649 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 SLC38A5Q8WUX1 472 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 DAOP14920 347 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 COMPP49747 757 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 SLIRPQ9GZT3 109 aaKnown RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 SULT2B1O00204 365 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 HMGN2P05204 90 aaKnown RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 SHC2P98077 582 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 INCA1Q0VD86 236 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 IER5LQ5T953 404 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 DPY19L2P2Q6ZN68 376 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 DIO2Q92813 273 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 SERINC2Q96SA4 455 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 FITM1A5D6W6 292 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 NPY1RP25929 384 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 ARG2P78540 354 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 ST3GAL2Q16842 350 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 GLIPR1L1Q6UWM5 242 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 LRRC18Q8N456 261 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 OR4B1Q8NGF8 309 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 CPPED1Q9BRF8 314 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 PIPOXQ9P0Z9 390 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 FUT9Q9Y231 359 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 IFITM10A6NMD0 228 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 ABCD4O14678 606 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 SPINK4O60575 86 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 ERASQ7Z444 233 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 GOT1L1Q8NHS2 421 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 MBOAT4Q96T53 435 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 CHST8Q9H2A9 424 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 OR51B6Q9H340 312 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 MANBALQ9NQG1 85 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 CLEC18AA5D8T8 446 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 SLC6A1P30531 599 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 OR1D4P47884 311 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 VRK2Q86Y07 508 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 CLEC18CQ8NCF0 446 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 GPR150Q8NGU9 434 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 DOCK6Q96HP0 2047 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 TRAV36DV7A0A075B6V5 113 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 OR4C45A6NMZ5 311 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 ZNF253O75346 499 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 PRSS1P07477 247 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 CTF1Q16619 201 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 MRM1Q6IN84 353 aaKnown RBP13.75□□□□□ -0.21
COL5A1-208ENST00000618395 MFSD12Q6NUT3 480 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 MRIQ9BWK5 157 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 DIP2CQ9Y2E4 1556 aa13.75□□□□□ -0.21
COL5A1-208ENST00000618395 IFITM5A6NNB3 132 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 BMI1P35226 326 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 ZNF805Q5CZA5 627 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 MMP21Q8N119 569 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 ANGPTL4Q9BY76 406 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 TECPR2O15040 1411 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 LRRC3CA6NJW4 275 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 CD3DP04234 171 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 FAM3BP58499 235 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-208ENST00000618395 PSAPL1Q6NUJ1 521 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 LIPIQ6XZB0 460 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 FBXO17Q96EF6 278 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 IL19Q9UHD0 177 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 KMT2EQ8IZD2 1858 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 RNGTTO60942 597 aaKnown RBP13.74□□□□□ -0.21
COL5A1-208ENST00000618395 DCTDP32321 178 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 HINT1P49773 126 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-208ENST00000618395 HSD17B8Q92506 261 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 PIGLQ9Y2B2 252 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 EPHA2P29317 976 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 BRS3P32247 399 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 CD96P40200 585 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 TRA2BP62995 288 aaKnown RBP13.74□□□□□ -0.21
COL5A1-208ENST00000618395 GPNMBQ14956 572 aa13.74□□□□□ -0.21
COL5A1-208ENST00000618395 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
COL5A1-208ENST00000618395 VCX2Q9H322 139 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms