RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 GPR84Q9NQS5 396 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 K7ESF4 209 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 WNT11O96014 354 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 DOC2BQ14184 412 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 MRGPREQ86SM8 312 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 WDSUB1Q8N9V3 476 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 PLEKHA3Q9HB20 300 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 ADGRL4Q9HBW9 690 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 EXOGQ9Y2C4 368 aaKnown RBP12.46□□□□□ -0.41
CIITA-213ENST00000618327 ARID1AO14497 2285 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 BHLHE40O14503 412 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
CIITA-213ENST00000618327 CNR1P21554 472 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 CEACAM16Q2WEN9 425 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 GLIPR1L1Q6UWM5 242 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 TRAPPC6BQ86SZ2 158 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 EXD3Q8N9H8 876 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 HINT2Q9BX68 163 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 GPR160Q9UJ42 338 aa12.46□□□□□ -0.41
CIITA-213ENST00000618327 SLC22A23A1A5C7 686 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 OR2M5A3KFT3 312 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 ICMTO60725 284 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 CNOT4O95628 575 aaKnown RBP12.46□□□□□ -0.42
CIITA-213ENST00000618327 GUSBP08236 651 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 BLVRBP30043 206 aaPredicted RBP12.46□□□□□ -0.42
CIITA-213ENST00000618327 OPCMLQ14982 345 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 SHBQ15464 509 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 LYPD4Q6UWN0 246 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 ADGRG3Q86Y34 549 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 PCNPQ8WW12 178 aaKnown RBP12.46□□□□□ -0.42
CIITA-213ENST00000618327 CTHRC1Q96CG8 243 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 CMSS1Q9BQ75 279 aaKnown RBP12.46□□□□□ -0.42
CIITA-213ENST00000618327 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 PBOV1Q9GZY1 135 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 RAB22AQ9UL26 194 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 FIGNL2A6NMB9 653 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 LIPCP11150 499 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 RRAS2P62070 204 aaPredicted RBP12.46□□□□□ -0.42
CIITA-213ENST00000618327 CEBPEQ15744 281 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 ZNF658BQ4V348 819 aaPredicted RBP12.46□□□□□ -0.42
CIITA-213ENST00000618327 ESCO2Q56NI9 601 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 FAM71CQ8NEG0 241 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 OR1M1Q8NGA1 313 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 GPA33Q99795 319 aa12.46□□□□□ -0.42
CIITA-213ENST00000618327 CCDC88CQ9P219 2028 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 TNFRSF10AO00220 468 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 DVL2O14641 736 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 CALCBP10092 127 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 CCL3P10147 92 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 BPIFB2Q8N4F0 458 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 SUMF2Q8NBJ7 301 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 OR52H1Q8NGJ2 320 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 GUCD1Q96NT3 240 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 GOLGB1Q14789 3259 aaKnown RBP12.45□□□□□ -0.42
CIITA-213ENST00000618327 PEX14O75381 377 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 ELK1P19419 428 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 CPT2P23786 658 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 ARR3P36575 388 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 TAS2R20P59543 309 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 EXOSC6Q5RKV6 272 aaKnown RBP12.45□□□□□ -0.42
CIITA-213ENST00000618327 FAM27D1Q5T7N8 215 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 PRR18Q8N4B5 295 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 JAM3Q9BX67 310 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 NTMQ9P121 344 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 PMS2P1A4D2B8 440 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 FABP7O15540 132 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 OR10D3Q8NH80 312 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 PELI1Q96FA3 418 aa12.45□□□□□ -0.42
CIITA-213ENST00000618327 ARHGEF17Q96PE2 2063 aaPredicted RBP12.45□□□□□ -0.42
CIITA-213ENST00000618327 AIPO00170 330 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 PCMT1P22061 227 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 CLDN6P56747 220 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 OR10A3P58181 314 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 SEC61A1P61619 476 aaKnown RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 RPS27AP62979 156 aaKnown RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 UBA52P62987 128 aaKnown RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 BEX5Q5H9J7 111 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 FHL5Q5TD97 284 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 Q6ZTK2 550 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 BHLHE23Q8NDY6 225 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 MED18Q9BUE0 208 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 CRLF2Q9HC73 371 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 SEMG1P04279 462 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 PSMB1P20618 241 aaKnown RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 PTBP1P26599 531 aaKnown RBP eCLIP12.44□□□□□ -0.42
CIITA-213ENST00000618327 CD82P27701 267 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 PMPCAQ10713 525 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 LYSMD2Q8IV50 215 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 OR6F1Q8NGZ6 308 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ST7LQ8TDW4 575 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 GIMAP1Q8WWP7 306 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 PSMF1Q92530 271 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 FOXB1Q99853 325 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ZNF416Q9BWM5 594 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 ZMAT3Q9HA38 289 aaKnown RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 DUSP13Q9UII6 198 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 PROCRQ9UNN8 238 aa12.44□□□□□ -0.42
CIITA-213ENST00000618327 TPRP12270 2363 aaKnown RBP12.44□□□□□ -0.42
CIITA-213ENST00000618327 GPANK1O95872 356 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms