RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SUCLG1P53597 346 aaKnown RBP16.91■□□□□ 0.3
MMP28-204ENST00000615136 FOXO1Q12778 655 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 ATP1A1-AS1Q5TC04 95 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 ZNF626Q68DY1 528 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 ZIC4Q8N9L1 334 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 OR4C16Q8NGL9 310 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 METTL17Q9H7H0 456 aaPredicted RBP16.91■□□□□ 0.3
MMP28-204ENST00000615136 HEXA-AS1Q9H8Q6 139 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 GDF2Q9UK05 429 aaPredicted RBP16.91■□□□□ 0.3
MMP28-204ENST00000615136 SNRPGP15A8MWD9 76 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 SMAD9O15198 467 aaKnown RBP16.91■□□□□ 0.3
MMP28-204ENST00000615136 TRAPPC6AO75865 159 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 CLDN15P56746 228 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 SSBP1Q04837 148 aaKnown RBP16.91■□□□□ 0.3
MMP28-204ENST00000615136 RBMS2Q15434 407 aaKnown RBP16.91■□□□□ 0.3
MMP28-204ENST00000615136 TGIF1Q15583 401 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 OR9K2Q8NGE7 335 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 FAM206AQ9NX38 181 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 PLA2G3Q9NZ20 509 aa16.91■□□□□ 0.3
MMP28-204ENST00000615136 SPAARA0A1B0GVQ0 90 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 LOC107986453A0A1B0GWG9 222 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 TSC22D2O75157 780 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 WDPCPO95876 746 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 HTR2CP28335 458 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 NUBP1P53384 320 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 CSRP2Q16527 193 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 THOC7Q6I9Y2 204 aaKnown RBP16.9■□□□□ 0.3
MMP28-204ENST00000615136 TEX261Q6UWH6 196 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 FAM109AQ8N4B1 249 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 OR6M1Q8NGM8 313 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 OR2T35Q8NGX2 323 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 NKD1Q969G9 470 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 RADILQ96JH8 1075 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 GPN1Q9HCN4 374 aaPredicted RBP16.9■□□□□ 0.3
MMP28-204ENST00000615136 ASH2LQ9UBL3 628 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 U3KQ87 197 aa16.9■□□□□ 0.3
MMP28-204ENST00000615136 TRAV18A0A075B6X5 111 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 MEGF11A6BM72 1044 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 STMND1H3BQB6 276 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 P2RY10O00398 339 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 RER1O15258 196 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 CREBL2O60519 120 aaPredicted RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 EIF1BO60739 113 aaKnown RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 ANXA7P20073 488 aaKnown RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 ITGA3P26006 1051 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 NTF4P34130 210 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 IKZF1Q13422 519 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 LGALSLQ3ZCW2 172 aaPredicted RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 ZNF704Q6ZNC4 412 aaPredicted RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 OR8H1Q8NGG4 311 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 OR13C3Q8NGS6 347 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 C1orf198Q9H425 327 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 B3GNT2Q9NY97 397 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 GLTPQ9NZD2 209 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 NCOA6Q14686 2063 aaPredicted RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 LOC390937A0A1W2PQ73 354 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 UBCP0CG48 685 aaKnown RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 GABRA1P14867 456 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 GDF1P27539 372 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 PRSS3P35030 304 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 CSNK2A1P68400 391 aaPredicted RBP16.89■□□□□ 0.29
MMP28-204ENST00000615136 GUCA2AQ02747 115 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 LINC00696Q6ZRV3 163 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 TMEM123Q8N131 208 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 GPX8Q8TED1 209 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 SORCS2Q96PQ0 1159 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 POLR1DQ9Y2S0 133 aa16.89■□□□□ 0.29
MMP28-204ENST00000615136 NPIPA2E9PIF3 369 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 NPIPA3F8WFD2 350 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 LDLRAD4O15165 306 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 TTRP02766 147 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 CELA3AP09093 270 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 CNR1P21554 472 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 MMP16P51512 607 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 GLYATL3Q5SZD4 288 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 TMEM244Q5VVB8 128 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 HDDC2Q7Z4H3 204 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 LYPD6Q86Y78 171 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 OR51A2Q8NGJ7 313 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 OR6N1Q8NGY5 312 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 ZNF837Q96EG3 531 aaPredicted RBP16.88■□□□□ 0.29
MMP28-204ENST00000615136 SFXN2Q96NB2 322 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 ATG5Q9H1Y0 275 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 PNRC2Q9NPJ4 139 aaKnown RBP16.88■□□□□ 0.29
MMP28-204ENST00000615136 PIPOXQ9P0Z9 390 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 MGAT4CQ9UBM8 478 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 ZNF69Q9UC07 566 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 LOC400499M0QZD8 3231 aa16.88■□□□□ 0.29
MMP28-204ENST00000615136 PYCARD-AS1I3L0S3 204 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 SULT1C2O00338 296 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 GIPP09681 153 aaPredicted RBP16.87■□□□□ 0.29
MMP28-204ENST00000615136 AKAIN1P0CW23 69 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 CSNK1A1P48729 337 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 POU4F3Q15319 338 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 ABHD17BQ5VST6 288 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 ADGRE4PQ86SQ3 457 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 MEIOBQ8N635 442 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 IL22RA1Q8N6P7 574 aa16.87■□□□□ 0.29
MMP28-204ENST00000615136 NKAIN3Q8N8D7 197 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms