RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CHST8Q9H2A9 424 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 ATXN7L1Q9ULK2 861 aaPredicted RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 SLC5A6Q9Y289 635 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 TRBV9A0A0B4J1U6 114 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 ELLP55199 621 aaPredicted RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 LEXMQ3ZCV2 418 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 GDF7Q7Z4P5 450 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 CELF5Q8N6W0 485 aaKnown RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 ADGRL4Q9HBW9 690 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 NAT8BQ9UHF3 227 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 DOK2O60496 412 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 B4GALT2O60909 372 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 TNFRSF1BP20333 461 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 PCMT1P22061 227 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 HRH1P35367 487 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 CDX1P47902 265 aaPredicted RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 DHRS2Q13268 280 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 SLC25A30Q5SVS4 291 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 DNLZQ5SXM8 178 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 Q7L0L9 218 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 PSAPL1Q6NUJ1 521 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 TMEM183AQ8IXX5 376 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 NLGN4XQ8N0W4 816 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 C11orf42Q8N5U0 333 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 NLGN4YQ8NFZ3 816 aaPredicted RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 SLAMF8Q9P0V8 285 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 C7orf66A4D0T2 115 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 ABOP16442 354 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 MRPS17Q9Y2R5 130 aaKnown RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 ADRA1AP35348 466 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 HTR6P50406 440 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 POM121Q96HA1 1249 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 TMEM11P17152 192 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 EIF1P41567 113 aaKnown RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 TEAD2Q15562 447 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 MRPL2Q5T653 305 aaKnown RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 OPN4Q9UHM6 478 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 ZNF28P17035 718 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 ALOX5APP20292 161 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 CRYBB2P43320 205 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 CYHR1Q6ZMK1 362 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 ABHD5Q8WTS1 349 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 NEIL1Q96FI4 390 aaPredicted RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 FAM71F1Q96KD3 344 aaPredicted RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 UTP23Q9BRU9 249 aaKnown RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 VN1R3Q9BXE9 311 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 CPEB1Q9BZB8 566 aaKnown RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 CFAP20Q9Y6A4 193 aaKnown RBP8.02□□□□□ -1.13
TTC28-208ENST00000612946 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 KIAA2026Q5HYC2 2103 aa8.02□□□□□ -1.13
TTC28-208ENST00000612946 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 PRF1P14222 555 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 TAL1P17542 331 aaPredicted RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 WDR34Q96EX3 536 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 COL11A1P12107 1806 aaPredicted RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 TRAV36DV7A0A075B6V5 113 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 A6NLC8 198 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 KDM4EB2RXH2 506 aaPredicted RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 H7C1C5 153 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 SPINT2O43291 252 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 FBXO45P0C2W1 286 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 RPL7P18124 248 aaKnown RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 ENPP1P22413 925 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 EVX2Q03828 476 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 ST3GAL2Q16842 350 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 NBPF12Q5TAG4 269 aaPredicted RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 FAM24BQ8N5W8 94 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 SPTAN1Q13813 2472 aaKnown RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 ZNF195O14628 629 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 OR8G3PP0DMU2 310 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 GLB1P16278 677 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 CRISP2P16562 243 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 FBLP22087 321 aaKnown RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 PPIAP62937 165 aaKnown RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 C1orf220Q5T0J3 134 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 WDTC1Q8N5D0 677 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 OR5R1Q8NH85 324 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 EPHX3Q9H6B9 360 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 RNF19AQ9NV58 838 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 WASHC3Q9Y3C0 194 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 OR1D4P47884 311 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 VRK2Q86Y07 508 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 PNPLA1Q8N8W4 532 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 DMBX1Q8NFW5 382 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 OR1F2PQ96R84 312 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 NIPSNAP1Q9BPW8 284 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 CYR61O00622 381 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 STC2O76061 302 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 HIST1H1CP16403 213 aaKnown RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 PRDM7Q9NQW5 492 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 SLC2A4RGQ9NR83 387 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 ITGB4P16144 1822 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 COL1A1P02452 1464 aaPredicted RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 USP2O75604 605 aaPredicted RBP8.01□□□□□ -1.13
TTC28-208ENST00000612946 DIO1P49895 249 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 NHLH1Q02575 133 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 GPM6BQ13491 265 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 HAO2Q9NYQ3 351 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 CPA4Q9UI42 421 aa8.01□□□□□ -1.13
TTC28-208ENST00000612946 ADAMTS4O75173 837 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms