RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 ZNF404Q494X3 552 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 SLC35F1Q5T1Q4 408 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 SLC18B1Q6NT16 456 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 NLRC3Q7RTR2 1065 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 PARP8Q8N3A8 854 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 SPRYD4Q8WW59 207 aaPredicted RBP12.34□□□□□ -0.43
FDPS-221ENST00000612683 SLC25A28Q96A46 364 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 C1orf147Q96MC9 270 aaPredicted RBP12.34□□□□□ -0.43
FDPS-221ENST00000612683 ATF6BQ99941 703 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 NSRP1Q9H0G5 558 aaKnown RBP12.34□□□□□ -0.43
FDPS-221ENST00000612683 MYLK2Q9H1R3 596 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 FN3KQ9H479 309 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
FDPS-221ENST00000612683 TMCC3Q9ULS5 477 aa12.34□□□□□ -0.43
FDPS-221ENST00000612683 SOX21Q9Y651 276 aaPredicted RBP12.34□□□□□ -0.43
FDPS-221ENST00000612683 KIR2DS1A0A191URI9 304 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 OR6C68A6NDL8 312 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 TMPRSS2O15393 492 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 IDH3BO43837 385 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 PPIAL4GP0DN37 164 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 ZNF823P16415 610 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 MSX2P35548 267 aaPredicted RBP12.33□□□□□ -0.44
FDPS-221ENST00000612683 PITPNBP48739 271 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 TPTEP56180 551 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 TRAP1Q12931 704 aaKnown RBP12.33□□□□□ -0.44
FDPS-221ENST00000612683 MAB21L1Q13394 359 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 KRTAP27-1Q3LI81 207 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 LYPD2Q6UXB3 125 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 PGAP1Q75T13 922 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 ZBTB46Q86UZ6 589 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 C19orf18Q8NEA5 215 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 SDR9C7Q8NEX9 313 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 OR11L1Q8NGX0 322 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 GNPDA2Q8TDQ7 276 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 UPRTQ96BW1 309 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 NUDT16L1Q9BRJ7 211 aaKnown RBP12.33□□□□□ -0.44
FDPS-221ENST00000612683 MED4Q9NPJ6 270 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 UFSP2Q9NUQ7 469 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 CLN8Q9UBY8 286 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 CYB5R1Q9UHQ9 305 aa12.33□□□□□ -0.44
FDPS-221ENST00000612683 WIPF1O43516 503 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 FSTL3O95633 263 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 RNASE1P07998 156 aaKnown RBP12.32□□□□□ -0.44
FDPS-221ENST00000612683 RRM2P31350 389 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 GGT2P36268 569 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 GATA4P43694 442 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 GSSP48637 474 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 RAD23AP54725 363 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 SLC9A3R2Q15599 337 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 OR8G1Q15617 311 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 PRAMEF6Q5VXH4 476 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 MRPL21Q7Z2W9 205 aaKnown RBP12.32□□□□□ -0.44
FDPS-221ENST00000612683 CELF2-AS1Q8N7Q2 184 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 ERGIC1Q969X5 290 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 FAM107BQ9H098 131 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 UNKLQ9H9P5 680 aaKnown RBP12.32□□□□□ -0.44
FDPS-221ENST00000612683 PNRC2Q9NPJ4 139 aaKnown RBP12.32□□□□□ -0.44
FDPS-221ENST00000612683 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
FDPS-221ENST00000612683 TRAV40A0A0B4J280 105 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 A0A1B0GWJ7 208 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 FAM20BO75063 409 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 SEMG1P04279 462 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 FABP3P05413 133 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 CA6P23280 308 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 PYCR1P32322 319 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 IL13RA1P78552 427 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.31□□□□□ -0.445e-13■■■■□ 23.9
FDPS-221ENST00000612683 TSPAN31Q12999 210 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 MPPED2Q15777 294 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 CLEC12AQ5QGZ9 265 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
FDPS-221ENST00000612683 DCDC5Q6ZRR9 648 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 C9orf139Q6ZV77 190 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 BOLLQ8N9W6 283 aaKnown RBP12.31□□□□□ -0.44
FDPS-221ENST00000612683 TAF15Q92804 592 aaKnown RBP eCLIP12.31□□□□□ -0.442e-8■■□□□ 12.7
FDPS-221ENST00000612683 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 MAP6Q96JE9 813 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 CDRT15Q96T59 188 aa12.31□□□□□ -0.44
FDPS-221ENST00000612683 MRPL22Q9NWU5 206 aaKnown RBP12.31□□□□□ -0.44
FDPS-221ENST00000612683 GGT3PA6NGU5 568 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 TVP23AA6NH52 213 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 POM121CA8CG34 1229 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 CD300LBA8K4G0 201 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 CLDN34H7C241 214 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 M0R135 149 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 PLATP00750 562 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 HSD17B1P14061 328 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 CD200P41217 278 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 RPS27P42677 84 aaKnown RBP12.3□□□□□ -0.44
FDPS-221ENST00000612683 FGF12P61328 243 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 SAMD4BQ5PRF9 694 aaKnown RBP12.3□□□□□ -0.44
FDPS-221ENST00000612683 SFRP4Q6FHJ7 346 aaPredicted RBP12.3□□□□□ -0.44
FDPS-221ENST00000612683 C16orf87Q6PH81 154 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 ZDHHC21Q8IVQ6 265 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 FITM2Q8N6M3 262 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 CYB561A3Q8NBI2 242 aa12.3□□□□□ -0.44
FDPS-221ENST00000612683 PROKR2Q8NFJ6 384 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms