RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CFAP77Q6ZQR2 320 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 COMMD2Q86X83 199 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 PAQR4Q8N4S7 273 aaPredicted RBP15.31■□□□□ 0.04
NEK3-206ENST00000611833 OR13C8Q8NGS7 320 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 OR5B2Q96R09 309 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 UQCC2Q9BRT2 126 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 CRB3Q9BUF7 120 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 EDEM2Q9BV94 578 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 FSCN3Q9NQT6 498 aa15.31■□□□□ 0.04
NEK3-206ENST00000611833 NOP16Q9Y3C1 178 aaKnown RBP15.31■□□□□ 0.04
NEK3-206ENST00000611833 A0A1W2PNR3 127 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 HLA-AP01891 365 aaKnown RBP15.3■□□□□ 0.04
NEK3-206ENST00000611833 LIPCP11150 499 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 SLC25A53Q5H9E4 307 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 RGS7BPQ6MZT1 257 aaPredicted RBP15.3■□□□□ 0.04
NEK3-206ENST00000611833 C3orf33Q6P1S2 294 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 OR51E1Q8TCB6 317 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 PFDN2Q9UHV9 154 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 FBXL2Q9UKC9 423 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 SESN1Q9Y6P5 492 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 RALGAPA1Q6GYQ0 2036 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 WDFY3Q8IZQ1 3526 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 WDR87Q6ZQQ6 2873 aa15.3■□□□□ 0.04
NEK3-206ENST00000611833 WIPF3A6NGB9 483 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 VSIG8P0DPA2 414 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 CDAP32320 146 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 FOXK1P85037 733 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 AWAT2Q6E213 333 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 ZNF546Q86UE3 836 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 GVQW1Q8N7I0 195 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 NOXO1Q8NFA2 376 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 SLC22A8Q8TCC7 542 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 NUDCD2Q8WVJ2 157 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 ZBTB8AQ96BR9 441 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 PDCD10Q9BUL8 212 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 DUSP23Q9BVJ7 150 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 C1QTNF6Q9BXI9 259 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 IFT46Q9NQC8 304 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 PISDQ9UG56 409 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 ZNF230Q9UIE0 474 aaPredicted RBP15.29■□□□□ 0.04
NEK3-206ENST00000611833 SLC5A6Q9Y289 635 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 LHFPL6Q9Y693 200 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 ZNF878C9JN71 531 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 SIGLEC6O43699 453 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 ZNF93P35789 620 aaPredicted RBP15.29■□□□□ 0.04
NEK3-206ENST00000611833 PRKXP51817 358 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 FGL1Q08830 312 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 OR52W1Q6IF63 320 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 ANGPTL5Q86XS5 388 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 HLA-CQ95604 372 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 CCDC74BQ96LY2 380 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 REG4Q9BYZ8 158 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 AKIRIN1Q9H9L7 192 aaPredicted RBP15.29■□□□□ 0.04
NEK3-206ENST00000611833 VSIG4Q9Y279 399 aa15.29■□□□□ 0.04
NEK3-206ENST00000611833 TRAV14DV4A0A0A6YYC5 116 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 MFSD2BA6NFX1 497 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 SPDEFO95238 335 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 ERCC1P07992 297 aaPredicted RBP15.28■□□□□ 0.04
NEK3-206ENST00000611833 PGA4P0DJD7 388 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 PGA3P0DJD8 388 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 GNB3P16520 340 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 AGTR1P30556 359 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 CALCRP30988 508 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 DHPSP49366 369 aaPredicted RBP15.28■□□□□ 0.04
NEK3-206ENST00000611833 ZNF101Q8IZC7 436 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 OR5M8Q8NGP6 311 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 OR6K3Q8NGY3 331 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 WBP1Q96G27 269 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 SELENOIQ9C0D9 397 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 COQ3Q9NZJ6 369 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 PLEKHA6Q9Y2H5 1048 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 PHF3Q92576 2039 aaKnown RBP15.28■□□□□ 0.04
NEK3-206ENST00000611833 OR14I1A6ND48 311 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 OR5H14A6NHG9 310 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 SCGNO76038 276 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 SFTPDP35247 375 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 QRFPP83859 136 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 MFAP5Q13361 173 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 SLC22A6Q4U2R8 563 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 ZNF660Q6AZW8 331 aaPredicted RBP15.28■□□□□ 0.04
NEK3-206ENST00000611833 SLC51BQ86UW2 128 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 SAP25Q8TEE9 199 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 DEFB126Q9BYW3 111 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 MED9Q9NWA0 146 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 SLC2A8Q9NY64 477 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 COMMD9Q9P000 198 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 C19orf25Q9UFG5 118 aaPredicted RBP15.28■□□□□ 0.04
NEK3-206ENST00000611833 B3GALT1Q9Y5Z6 326 aa15.28■□□□□ 0.04
NEK3-206ENST00000611833 IGLV3-32A0A0A0MS00 114 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 A0A1B0GTI1 187 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 CCDC85CA6NKD9 419 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 SLC2A1P11166 492 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 P2RY4P51582 365 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 GABREP78334 506 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 LYSMD4Q5XG99 296 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 LPCAT3Q6P1A2 487 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 ABHD12BQ7Z5M8 362 aaPredicted RBP15.27■□□□□ 0.04
NEK3-206ENST00000611833 SLC38A6Q8IZM9 456 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 GALNT11Q8NCW6 608 aa15.27■□□□□ 0.04
NEK3-206ENST00000611833 ADPRHL1Q8NDY3 354 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms