RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 C17orf51A8MQB3 221 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 RFPL4AL1F8VTS6 287 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 STMND1H3BQB6 276 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 SDCBPO00560 298 aaPredicted RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 FBXO24O75426 580 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 HLA-DOBP13765 273 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ABOP16442 354 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 CASRP41180 1078 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 AKR1C2P52895 323 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 RPS11P62280 158 aaKnown RBP eCLIP7.78□□□□□ -1.16
LIG4-204ENST00000611712 AKR1C1Q04828 323 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 MYBPHQ13203 477 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ACOT7LQ6ZUV0 252 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 CDH26Q8IXH8 852 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ST8SIA2Q92186 375 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 MRGPRX4Q96LA9 322 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 NMNAT2Q9BZQ4 307 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 DOCK9Q9BZ29 2069 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 TCRBV16S1A1N1A0A5B0 115 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 NPIPB9F8W1W9 429 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 SERPINF1P36955 418 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ZNF121P58317 390 aaPredicted RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 INSM1Q01101 510 aaPredicted RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 PLGLB1Q02325 96 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 DOK3Q7L591 496 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 LYG2Q86SG7 212 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 KMT5CQ86Y97 462 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 EXD3Q8N9H8 876 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 GJC3Q8NFK1 279 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 OR52N4Q8NGI2 321 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 OR10R2Q8NGX6 335 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ZNF721Q8TF20 911 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 SLC25A43Q8WUT9 341 aaPredicted RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 FGF11Q92914 225 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 TRBV5-5A0A0J9YX44 114 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 A0A1B0GV50 99 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 BPNT1O95861 308 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 TXNDC12O95881 172 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 RRASP10301 218 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 MGMTP16455 207 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 M6PRP20645 277 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 NXPH1P58417 271 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 GRB2P62993 217 aaKnown RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 SRYQ05066 204 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 SNTB1Q13884 538 aaKnown RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 GNMTQ14749 295 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 PRSS35Q8N3Z0 413 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 GALNT16Q8N428 558 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 ZBTB44Q8NCP5 570 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 TTC9Q92623 222 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 CHST6Q9GZX3 395 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 CNTD2Q9H8S5 307 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 TMEM184BQ9Y519 407 aaPredicted RBP7.78□□□□□ -1.16
LIG4-204ENST00000611712 CSAG2Q9Y5P2 127 aa7.78□□□□□ -1.16
LIG4-204ENST00000611712 AHCTF1Q8WYP5 2266 aa7.77□□□□□ -1.16
LIG4-204ENST00000611712 A0A1W2PQD3 144 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 DDAH2O95865 285 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 CFDP00746 253 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 CPT2P23786 658 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 PSMB6P28072 239 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 FOLR3P41439 243 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 SUMO3P55854 103 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 RAB2AP61019 212 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 RPS4XP62701 263 aaKnown RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 BAMBIQ13145 260 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 COL13A1Q5TAT6 717 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 DEGS2Q6QHC5 323 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 GVQW1Q8N7I0 195 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 MAFIPQ8WZ33 124 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 SEH1LQ96EE3 360 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 SYT3Q9BQG1 590 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 SLC5A7Q9GZV3 580 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 ANKRD10Q9NXR5 420 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 ASXL3Q9C0F0 2248 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 JMJD7P0C870 316 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 GNRHRP30968 328 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 BTCP35070 178 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 EGR4Q05215 589 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 TMEM71Q6P5X7 295 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 LRRTM1Q86UE6 522 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 SMRP1Q8NCR6 262 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 AGBL5Q8NDL9 886 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 OR10G3Q8NGC4 313 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 CD300LFQ8TDQ1 290 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 RGP1Q92546 391 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 CMSS1Q9BQ75 279 aaKnown RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 MOB1AQ9H8S9 216 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 ZNF275Q9NSD4 429 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 PNPP00491 289 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 VSIG10L2P0DP72 767 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 CD96P40200 585 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 SSR4P51571 173 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 IGLV3-21P80748 117 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 PTCRAQ6ISU1 281 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 ALKBH2Q6NS38 261 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 LINC00114Q6XXX2 140 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 FAM122BQ7Z309 247 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 CATSPERDQ86XM0 798 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms