RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SLC25A27O95847 323 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 ASS1P00966 412 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 IFNA14P01570 189 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 IGHV2-5P01817 119 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 C2P06681 752 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 CSF3P09919 207 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 OR4E1P0C645 316 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 GKN3PP0CG01 181 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 MAGP20916 626 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 SYT1P21579 422 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 CD82P27701 267 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 MAS1LP35410 378 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 CEACAM3P40198 252 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 MNAT1P51948 309 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 REG3AQ06141 175 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 RAD51Q06609 339 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 STX5Q13190 355 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 FZD2Q14332 565 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 MRPL23Q16540 153 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 IMPG1Q17R60 797 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 PIGGQ5H8A4 983 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 C6orf183Q5T699 404 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 OR52W1Q6IF63 320 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 APOBEC3HQ6NTF7 200 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 TIFABQ6ZNK6 161 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 C6orf120Q7Z4R8 191 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 CAMK2N1Q7Z7J9 78 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 TMEM25Q86YD3 366 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 CMTM8Q8IZV2 173 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 SYS1Q8N2H4 156 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 ZADH2Q8N4Q0 377 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 TMEM156Q8N614 296 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF557Q8N988 423 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 Q8N9L7 120 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 LRRC75AQ8NAA5 344 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 OR4F6Q8NGB9 312 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 OR5D18Q8NGL1 313 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 OR2G2Q8NGZ5 317 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 DNAJB3Q8WWF6 145 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 TMEM158Q8WZ71 300 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 IL22RA2Q969J5 263 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 PPP1R36Q96LQ0 422 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 MBOAT7Q96N66 472 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 HDHD3Q9BSH5 251 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 TMEM59Q9BXS4 323 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 LHX5Q9H2C1 402 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 WDR55Q9H6Y2 383 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 PTTG3PQ9NZH4 202 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 CLN8Q9UBY8 286 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 STARD10Q9Y365 291 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 WSB1Q9Y6I7 421 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 URGCP-MRPS24S4R325 110 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 CDC42BPBQ9Y5S2 1711 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 PHF3Q92576 2039 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 A0A1B0GW15 77 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 PRSS37A4D1T9 235 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SMLR1H3BR10 107 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 CLDN34H7C241 214 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 CCL21O00585 134 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SIVA1O15304 175 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 RPN2P04844 631 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 HMGN1P05114 100 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SERPIND1P05546 499 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SNRPAP09012 282 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 HOXC4P09017 264 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 OCMP0CE72 109 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 GIMD1P0DJR0 217 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 COX5BP10606 129 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 KITLGP21583 273 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 BGNP21810 368 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 HSD11B1P28845 292 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 GPR6P46095 362 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 GNG10P50151 68 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 CCR6P51684 374 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SUB1P53999 127 aaKnown RBP eCLIP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 CXCR4P61073 352 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 MAGOHP61326 146 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 ARF6P62330 175 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 LCN2P80188 198 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 TRAM2Q15035 370 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 PDK2Q15119 407 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 ZBED5Q49AG3 693 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 STUMQ69YW2 141 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SLC51BQ86UW2 128 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 APRG1Q8IVJ8 170 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 PUSL1Q8N0Z8 303 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 NECAP1Q8NC96 275 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 C19orf18Q8NEA5 215 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 B3GNT7Q8NFL0 401 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 OR4D6Q8NGJ1 314 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SDR42E1Q8WUS8 393 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SRSF12Q8WXF0 261 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 CPNE4Q96A23 557 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 MED8Q96G25 268 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF578Q96N58 590 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 KCTD14Q9BQ13 255 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 ECSITQ9BQ95 431 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 ZNF251Q9BRH9 671 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 MED10Q9BTT4 135 aa2.76□□□□□ -1.97
SMCHD1-213ENST00000609587 SRRQ9GZT4 340 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms