RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
USP6NL-205ENST00000609104 MRPS2Q9Y399 296 aaKnown RBP11.91□□□□□ -0.5
USP6NL-205ENST00000609104 TBXA2RP21731 343 aa11.91□□□□□ -0.5
USP6NL-205ENST00000609104 HTRA3P83110 453 aa11.91□□□□□ -0.5
USP6NL-205ENST00000609104 DRAM2Q6UX65 266 aa11.91□□□□□ -0.5
USP6NL-205ENST00000609104 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
USP6NL-205ENST00000609104 ZBTB42B2RXF5 422 aa11.91□□□□□ -0.5
USP6NL-205ENST00000609104 DHRS9Q9BPW9 319 aa11.91□□□□□ -0.5
USP6NL-205ENST00000609104 NXF2Q9GZY0 626 aaKnown RBP11.91□□□□□ -0.5
USP6NL-205ENST00000609104 A0A1W2PNR3 127 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 RAB1AP62820 205 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 NCR3LG1Q68D85 454 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 ZADH2Q8N4Q0 377 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 PHOSPHO2Q8TCD6 241 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 COMMD1Q8N668 190 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 SLC37A2Q8TED4 501 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 LIN7CQ9NUP9 197 aaKnown RBP11.9□□□□□ -0.5
USP6NL-205ENST00000609104 MDC1Q14676 2089 aaKnown RBP11.9□□□□□ -0.5
USP6NL-205ENST00000609104 DEFB108BQ8NET1 73 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 ANKRD34AQ69YU3 496 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 OR13H1Q8NG92 308 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 OR10AD1Q8NGE0 317 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 MARCH1Q8TCQ1 289 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 LHX4Q969G2 390 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 CCDC74BQ96LY2 380 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 OPALINQ96PE5 141 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 ATF6BQ99941 703 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 HINT3Q9NQE9 182 aaKnown RBP11.9□□□□□ -0.5
USP6NL-205ENST00000609104 ANKUB1A6NFN9 424 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
USP6NL-205ENST00000609104 A0A1W2PR48 441 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 EN2P19622 333 aaPredicted RBP11.9□□□□□ -0.5
USP6NL-205ENST00000609104 ANKRD16Q6P6B7 361 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 ARSGQ96EG1 525 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 SMIM7Q9BQ49 75 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 IKZF5Q9H5V7 419 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 XKRY2A2RUG3 117 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 USF1P22415 310 aaPredicted RBP11.9□□□□□ -0.5
USP6NL-205ENST00000609104 ERVFC1-1P60608 527 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 RPS16P62249 146 aaKnown RBP11.9□□□□□ -0.5
USP6NL-205ENST00000609104 SCPEP1Q9HB40 452 aa11.9□□□□□ -0.5
USP6NL-205ENST00000609104 RRASP10301 218 aa11.9□□□□□ -0.51
USP6NL-205ENST00000609104 CLDN20P56880 219 aa11.9□□□□□ -0.51
USP6NL-205ENST00000609104 FAM157BP0CG42 384 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 SOX18P35713 384 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 MAGT1Q9H0U3 335 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 MBP02144 154 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 CMC2Q9NRP2 79 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 POLDIP2Q9Y2S7 368 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 ZNF816Q0VGE8 651 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-205ENST00000609104 OR2T2Q6IF00 324 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 NDRG4Q9ULP0 352 aaKnown RBP11.89□□□□□ -0.51
USP6NL-205ENST00000609104 PNPP00491 289 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 KLKB1P03952 638 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 LDLRAD1Q5T700 205 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 FCRL6Q6DN72 434 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 ZAR1LA6NP61 321 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 J3QR89 54 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 MGMTP16455 207 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 CMBLQ96DG6 245 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 OR8B4Q96RC9 309 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 ARHGDIGQ99819 225 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 KCND3Q9UK17 655 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 EIF4E2O60573 245 aaKnown RBP11.89□□□□□ -0.51
USP6NL-205ENST00000609104 SMIM17P0DL12 118 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 CST5P28325 142 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-205ENST00000609104 VWA2Q5GFL6 755 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 TSEN54Q7Z6J9 526 aaKnown RBP11.89□□□□□ -0.51
USP6NL-205ENST00000609104 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 RDH5Q92781 318 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 MOB1BQ7L9L4 216 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 MOB1AQ9H8S9 216 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 VEGFBP49765 207 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 DUSP8Q13202 625 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 LOC102723971A0A1B0GUV8 181 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 AANATQ16613 207 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 Q1RN00 199 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 TIGITQ495A1 244 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 ZNF573Q86YE8 665 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 FAM26EQ8N5C1 309 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 TRIB1Q96RU8 372 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 CHST6Q9GZX3 395 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 CXCL16Q9H2A7 254 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 MBNL1Q9NR56 388 aaKnown RBP11.89□□□□□ -0.51
USP6NL-205ENST00000609104 DLL4Q9NR61 685 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 MYO7AQ13402 2215 aa11.89□□□□□ -0.51
USP6NL-205ENST00000609104 TRIP12Q14669 1992 aaPredicted RBP11.89□□□□□ -0.51
USP6NL-205ENST00000609104 DMRTC1Q5HYR2 192 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 ADAMTS5Q9UNA0 930 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 PIKFYVEQ9Y2I7 2098 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 M0R135 149 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 ARRB2P32121 409 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 NUDCD2Q8WVJ2 157 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 MS4A6EQ96DS6 147 aa11.88□□□□□ -0.51
USP6NL-205ENST00000609104 ZNF799Q96GE5 643 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms