RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 LCATP04180 440 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 IRF2P14316 349 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 HIST1H1CP16403 213 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 OMGP23515 440 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 GATA4P43694 442 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 KRTAP27-1Q3LI81 207 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 SLC36A3Q495N2 470 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 WDR25Q64LD2 544 aaPredicted RBP11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 SLC18B1Q6NT16 456 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 ZNF841Q6ZN19 808 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 CFAP77Q6ZQR2 320 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 DCDC5Q6ZRR9 648 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 NLRC3Q7RTR2 1065 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 FITM2Q8N6M3 262 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 C19orf18Q8NEA5 215 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 SLC26A10Q8NG04 563 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 OR10S1Q8NGN2 331 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 OR2AJ1Q8NGZ0 328 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 TMIGD2Q96BF3 282 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 DHRS1Q96LJ7 313 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 OR52D1Q9H346 318 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 CCDC134Q9H6E4 229 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 RPRD1BQ9NQG5 326 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 UFSP2Q9NUQ7 469 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 ABCD2Q9UBJ2 740 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 SAMD4AQ9UPU9 718 aaKnown RBP11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 ARPC3O15145 178 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 HOXA3O43365 443 aaPredicted RBP11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 FAM20BO75063 409 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 SLC6A6P31641 620 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 FGF12P61328 243 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 ECH1Q13011 328 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 MALLQ13021 153 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 MPPED2Q15777 294 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 PRAMEF6Q5VXH4 476 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 BRD3OSQ6XYD6 125 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 PGAP1Q75T13 922 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 ZBTB46Q86UZ6 589 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 RNF148Q8N7C7 305 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 CELF2-AS1Q8N7Q2 184 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 OR11L1Q8NGX0 322 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 FANK1Q8TC84 345 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 Q8TCH9 128 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 ERGIC1Q969X5 290 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 ATF6BQ99941 703 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 IFT27Q9BW83 186 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 SLITRK2Q9H156 845 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 CYB5R1Q9UHQ9 305 aa11.15□□□□□ -0.62
POLR2J3-219ENST00000608621 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 GMNNO75496 209 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 GADD45GO95257 159 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 HLA-DQA2P01906 255 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 CA6P23280 308 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 NOS3P29474 1203 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 GGT2P36268 569 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 PSMB10P40306 273 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 CD200P41217 278 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 RAD23AP54725 363 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 TPTEP56180 551 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 SMIM11AP58511 58 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 HOXA4Q00056 320 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 TRAP1Q12931 704 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 CLEC12AQ5QGZ9 265 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 SPATC1Q76KD6 591 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 SPRYD4Q8WW59 207 aaPredicted RBP11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 PYURFQ96I23 114 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 FN3KQ9H479 309 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 PRDM13Q9H4Q3 707 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 PNRC2Q9NPJ4 139 aaKnown RBP11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 TNFRSF19Q9NS68 423 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 ADA2Q9NZK5 511 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 TMCC3Q9ULS5 477 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 V9GYQ6 96 aa11.14□□□□□ -0.63
POLR2J3-219ENST00000608621 C22orf46C9J442 243 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 PHYHO14832 338 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 OR10H3O60404 316 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 SPIBQ01892 262 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 OR8G1Q15617 311 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 SLC35F1Q5T1Q4 408 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 GPR157Q5UAW9 335 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 SFRP4Q6FHJ7 346 aaPredicted RBP11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 MRPL21Q7Z2W9 205 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 BOLLQ8N9W6 283 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 SDR9C7Q8NEX9 313 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 CMTM5Q96DZ9 223 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 MAP6Q96JE9 813 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 NSRP1Q9H0G5 558 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 GORASP2Q9H8Y8 452 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 SPAG4Q9NPE6 437 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 MRPL22Q9NWU5 206 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 ERVK-18Q9QC07 812 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 RNF7Q9UBF6 113 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 MMP24Q9Y5R2 645 aa11.13□□□□□ -0.63
POLR2J3-219ENST00000608621 FAM181BA6NEQ2 426 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms