RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 CMC4P56277 68 aaPredicted RBP1.65□□□□□ -2.15
HDDC2-207ENST00000608532 TNFRSF9Q07011 255 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 BST1Q10588 318 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 DEGS2Q6QHC5 323 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 C12orf54Q6X4T0 127 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 USP50Q70EL3 339 aaPredicted RBP1.65□□□□□ -2.15
HDDC2-207ENST00000608532 FAM71AQ8IYT1 594 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 ZCCHC7Q8N3Z6 543 aaKnown RBP1.65□□□□□ -2.15
HDDC2-207ENST00000608532 OR10G6Q8NH81 332 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 OR51E1Q8TCB6 317 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 ECHDC3Q96DC8 303 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 KLF6Q99612 283 aaPredicted RBP1.65□□□□□ -2.15
HDDC2-207ENST00000608532 LINC00574Q9H8X3 128 aa1.65□□□□□ -2.15
HDDC2-207ENST00000608532 CSDC2Q9Y534 153 aaKnown RBP1.65□□□□□ -2.15
HDDC2-207ENST00000608532 USP47Q96K76 1375 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 SYCE1LA8MT33 242 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 J3QKU1 62 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 SERPINB7O75635 380 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 PTMAP06454 111 aaKnown RBP1.64□□□□□ -2.15
HDDC2-207ENST00000608532 CD99P14209 185 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 NCF2P19878 526 aaPredicted RBP1.64□□□□□ -2.15
HDDC2-207ENST00000608532 HNMTP50135 292 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 ARFIP1P53367 373 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 EIF3EP60228 445 aaKnown RBP1.64□□□□□ -2.15
HDDC2-207ENST00000608532 RPL23AP62750 156 aaKnown RBP1.64□□□□□ -2.15
HDDC2-207ENST00000608532 PNOCQ13519 176 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 PRAMEF5Q5TYX0 476 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 PRAMEF6Q5VXH4 476 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 RNASEKQ6P5S7 137 aaKnown RBP1.64□□□□□ -2.15
HDDC2-207ENST00000608532 NPSR1Q6W5P4 371 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 MDP1Q86V88 176 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 ERO1BQ86YB8 467 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 UBE2J2Q8N2K1 259 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 GTPBP8Q8N3Z3 284 aaPredicted RBP1.64□□□□□ -2.15
HDDC2-207ENST00000608532 SNX31Q8N9S9 440 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 GHSRQ92847 366 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 TMEM159Q96B96 161 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 ZBTB18Q99592 522 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 OR51M1Q9H341 326 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 HYPKQ9NX55 129 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 TICRRQ7Z2Z1 1910 aa1.64□□□□□ -2.15
HDDC2-207ENST00000608532 ZSWIM8A7E2V4 1837 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 TRIP11Q15643 1979 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 A0A1B0GUH1 482 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 C4orf51C9J302 202 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 H7C1H1 209 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 TNFRSF11BO00300 401 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 ZNF24P17028 368 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 IL32P24001 234 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 SP4Q02446 784 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 SLC25A35Q3KQZ1 300 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 PYDC2Q56P42 97 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 NT5DC3Q86UY8 548 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 OR2Z1Q8NG97 314 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 TRIM44Q96DX7 344 aaPredicted RBP1.63□□□□□ -2.15
HDDC2-207ENST00000608532 NUDT9Q9BW91 350 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 SLC2A8Q9NY64 477 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 TAS2R1Q9NYW7 299 aa1.63□□□□□ -2.15
HDDC2-207ENST00000608532 PDP1Q9P0J1 537 aaPredicted RBP1.63□□□□□ -2.15
HDDC2-207ENST00000608532 NCBP2LA6PVI3 153 aaKnown RBP1.62□□□□□ -2.15
HDDC2-207ENST00000608532 RAD51CO43502 376 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 GATBO75879 557 aaKnown RBP1.62□□□□□ -2.15
HDDC2-207ENST00000608532 ACLYP53396 1101 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 BIKQ13323 160 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 ART3Q13508 389 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 DDX39BQ13838 428 aaKnown RBP1.62□□□□□ -2.15
HDDC2-207ENST00000608532 ZMYND11Q15326 602 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 TMEM107Q6UX40 140 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 PPP1R42Q7Z4L9 355 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 NUBPLQ8TB37 319 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 RAB3IL1Q8TBN0 382 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 PKMYT1Q99640 499 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 GCOM2Q9BZD3 368 aaPredicted RBP1.62□□□□□ -2.15
HDDC2-207ENST00000608532 PARP11Q9NR21 331 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 SLC17A7Q9P2U7 560 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 FARSAQ9Y285 508 aaKnown RBP1.62□□□□□ -2.15
HDDC2-207ENST00000608532 TSPOAP1O95153 1857 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 ADGRA3Q8IWK6 1321 aa1.62□□□□□ -2.15
HDDC2-207ENST00000608532 AKNAQ7Z591 1439 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 XKRY2A2RUG3 117 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 OR7C2O60412 319 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 FLOT1O75955 427 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 SERPINA3P01011 423 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 MT-ND4P03905 459 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 INAFM2P0DMQ5 153 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 HSPD1P10809 573 aaKnown RBP1.61□□□□□ -2.15
HDDC2-207ENST00000608532 POLR2IP36954 125 aaKnown RBP1.61□□□□□ -2.15
HDDC2-207ENST00000608532 ACTR1AP61163 376 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 PPP1R7Q15435 360 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 TAF7Q15545 349 aaPredicted RBP1.61□□□□□ -2.15
HDDC2-207ENST00000608532 CHRNA6Q15825 494 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 PSMD5Q16401 504 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 C1orf185Q5T7R7 199 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 CERS6Q6ZMG9 384 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 MBOAT2Q6ZWT7 520 aa1.61□□□□□ -2.15
HDDC2-207ENST00000608532 DAZ4Q86SG3 579 aaKnown RBP1.61□□□□□ -2.15
HDDC2-207ENST00000608532 CMTM1Q8IZ96 169 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms