RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 CRMP1Q14194 572 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 GK2Q14410 553 aaPredicted RBP15.26■□□□□ 0.03
CCDC12-208ENST00000603885 ZMYND11Q15326 602 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 LRRC28Q86X40 367 aaPredicted RBP15.26■□□□□ 0.03
CCDC12-208ENST00000603885 OR10G2Q8NGC3 310 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 OR4Q3Q8NH05 313 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 ZNRF4Q8WWF5 429 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 ZNF799Q96GE5 643 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 SIGLEC11Q96RL6 698 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 THTPAQ9BU02 230 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 RBM4Q9BWF3 364 aaKnown RBP15.26■□□□□ 0.03
CCDC12-208ENST00000603885 DDX28Q9NUL7 540 aaKnown RBP15.26■□□□□ 0.03
CCDC12-208ENST00000603885 TMEM100Q9NV29 134 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 COMMD3-BMI1R4GMX3 469 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 ANK2Q01484 3957 aa15.26■□□□□ 0.03
CCDC12-208ENST00000603885 A0A0A6YYJ9 748 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 RIIAD1A6NNX1 92 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 H0YL77 283 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 TMEM178BH3BS89 294 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 ACOT8O14734 319 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 MLNRO43193 412 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 CST1P01037 141 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 AVPP01185 164 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 RBMXP38159 391 aaKnown RBP15.25■□□□□ 0.03
CCDC12-208ENST00000603885 MDH2P40926 338 aaKnown RBP15.25■□□□□ 0.03
CCDC12-208ENST00000603885 SLC6A9P48067 706 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 SLC25A1P53007 311 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 LYPD4Q6UWN0 246 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 C1orf229Q6ZS94 237 aaPredicted RBP15.25■□□□□ 0.03
CCDC12-208ENST00000603885 PGAP1Q75T13 922 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 NAA40Q86UY6 237 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 MUC20Q8N307 709 aaPredicted RBP15.25■□□□□ 0.03
CCDC12-208ENST00000603885 OR10S1Q8NGN2 331 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 SLCO4A1Q96BD0 722 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 CHID1Q9BWS9 393 aa15.25■□□□□ 0.03
CCDC12-208ENST00000603885 PATZ1Q9HBE1 687 aaKnown RBP15.25■□□□□ 0.03
CCDC12-208ENST00000603885 PPIAL4EA0A075B759 164 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 PPIAL4CA0A0B4J2A2 164 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 PPIAL4DF5H284 164 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 F5H5P2 479 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 GYPBP06028 91 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 SPARCP09486 303 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 PPIAL4FP0DN26 164 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 ZNF3P17036 446 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 SPI1P17947 270 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 EPHA1P21709 976 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 ENTPD1P49961 510 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 PRSS12P56730 875 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 CD300LDQ6UXZ3 194 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 MRPL21Q7Z2W9 205 aaKnown RBP15.24■□□□□ 0.03
CCDC12-208ENST00000603885 DCXRQ7Z4W1 244 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 C1QL2Q7Z5L3 287 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 ADGRG5Q8IZF4 528 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 TEX47Q8TBZ9 253 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 ZNF418Q8TF45 676 aaPredicted RBP15.24■□□□□ 0.03
CCDC12-208ENST00000603885 GIPC3Q8TF64 312 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 SPRYD4Q8WW59 207 aaPredicted RBP15.24■□□□□ 0.03
CCDC12-208ENST00000603885 NIPSNAP1Q9BPW8 284 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 COPS4Q9BT78 406 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 NMNAT2Q9BZQ4 307 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 C7orf69Q9H7B7 122 aa15.24■□□□□ 0.03
CCDC12-208ENST00000603885 A0A1B0GWJ7 208 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 DHRS12A0PJE2 317 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 ARRDC5A6NEK1 342 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 AQP12BA6NM10 295 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 LRRC30A6NM36 301 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 GNGT2O14610 69 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 HOXB6P17509 224 aaKnown RBP15.23■□□□□ 0.03
CCDC12-208ENST00000603885 ZFP36P26651 326 aaKnown RBP15.23■□□□□ 0.03
CCDC12-208ENST00000603885 OTX1P32242 354 aaPredicted RBP15.23■□□□□ 0.03
CCDC12-208ENST00000603885 BLVRAP53004 296 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 TAF13Q15543 124 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 PCK2Q16822 640 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 DRAM2Q6UX65 266 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 TRPM8Q7Z2W7 1104 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 MOGAT3Q86VF5 341 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 AQP12AQ8IXF9 295 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 ZNF511Q8NB15 262 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 OR6K6Q8NGW6 343 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 ZNF420Q8TAQ5 688 aaPredicted RBP15.23■□□□□ 0.03
CCDC12-208ENST00000603885 NANPQ8TBE9 248 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 FEVQ99581 238 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 CMC2Q9NRP2 79 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 ARHGAP32A7KAX9 2087 aa15.23■□□□□ 0.03
CCDC12-208ENST00000603885 IGHV3-64DA0A0J9YX35 117 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 H3BN98 237 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 ZNF593O00488 134 aaPredicted RBP15.22■□□□□ 0.03
CCDC12-208ENST00000603885 HLA-DPB1P04440 258 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 CLUP10909 449 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 PSKH1P11801 424 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 ADRA2CP18825 462 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 ZNF181Q2M3W8 571 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 SNAI3Q3KNW1 292 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 DNAL1Q4LDG9 190 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 ESCO2Q56NI9 601 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 TEX30Q5JUR7 227 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 C1orf87Q8N0U7 546 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 CANT1Q8WVQ1 401 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 SLAMF6Q96DU3 332 aa15.22■□□□□ 0.03
CCDC12-208ENST00000603885 CENPMQ9NSP4 180 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms