RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 MED17Q9NVC6 651 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 TAS2R4Q9NYW5 299 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 ATAD5Q96QE3 1844 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SDCBPO00560 298 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 EVX1P49640 407 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 LINC00299Q6ZSB3 139 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 GDF7Q7Z4P5 450 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 LHX4Q969G2 390 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 CASD1Q96PB1 797 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 MBTPS2O43462 519 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 UTS2O95399 124 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SLC6A12P48065 614 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SLC25A35Q3KQZ1 300 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 PTRH1Q86Y79 214 aaKnown RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 LGI3Q8N145 548 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 TNFRSF13CQ96RJ3 184 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SLIRPQ9GZT3 109 aaKnown RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 LPAR5Q9H1C0 372 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 H0YIV9 168 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 TACR1P25103 407 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 PCK2Q16822 640 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 FAM78AQ5JUQ0 283 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 CTDSP1Q9GZU7 261 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 MBLAC1A4D2B0 266 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-216ENST00000602557 FURINP09958 794 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 OR2T7P0C7T2 308 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SSR4P51571 173 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 PELI3Q8N2H9 469 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 C9orf62Q8N4C0 152 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 OR2T27Q8NH04 317 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 CMTM2Q8TAZ6 248 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 SYT11Q9BT88 431 aa7.95□□□□□ -1.14
CSMD1-216ENST00000602557 DUSP1P28562 367 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 GNG10P50151 68 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 MORN1Q5T089 497 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 HTR3DQ70Z44 454 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 C19orf47Q8N9M1 422 aaKnown RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CRYGNQ8WXF5 182 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 SLC2A8Q9NY64 477 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 PADI1Q9ULC6 663 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 DRGXA6NNA5 263 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 MCRIP1C9JLW8 97 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 PRDX1Q06830 199 aaKnown RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 GGTA1PQ4G0N0 100 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF385CQ66K41 422 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 ETFBKMTQ8IXQ9 262 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 KCNG3Q8TAE7 436 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 TOGARAM1Q9Y4F4 1720 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 SLC2A10O95528 541 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 EPHA2P29317 976 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 SLC35A1P78382 337 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 MED25Q71SY5 747 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 ZNF595Q8IYB9 648 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 OR5B3Q8NH48 314 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 TCTN2Q96GX1 697 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 EDEM2Q9BV94 578 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 PARD6GQ9BYG4 376 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 HSF4Q9ULV5 492 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 GPR55Q9Y2T6 319 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 FAM74A7A6NL05 159 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 HRH1P35367 487 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 FOXK2Q01167 660 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 Q499Y3 187 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 FAM74A3Q4VXF1 159 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 DHRS13Q6UX07 377 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 OR6K3Q8NGY3 331 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 WDR76Q9H967 626 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 NDRG4Q9ULP0 352 aaKnown RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 ELOA3CA0A087WX78 387 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 SRPXP78539 464 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 DEFB103AP81534 67 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CLEC14AQ86T13 490 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 PHYHIPQ92561 330 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 C19orf43Q9BQ61 176 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CLSTN3Q9BQT9 956 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 WNT1P04628 370 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 EPXP11678 715 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 TRNP1Q6NT89 227 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 INSM2Q96T92 566 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 RAB22AQ9UL26 194 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CER1O95813 267 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 F12P00748 615 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 DCAF7P61962 342 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 FAM219BQ5XKK7 198 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CCDC190Q86UF4 302 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 OR52N1Q8NH53 320 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 SERINC4A6NH21 518 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 M0QZK8 103 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 GGCTO75223 188 aaKnown RBP7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CD38P28907 300 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 MAJINQ3KP22 176 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 PRR27Q6MZM9 219 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 LKAAEAR1Q8TD35 194 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 MUCL1Q96DR8 90 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 TSSK2Q96PF2 358 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 CXorf36Q9H7Y0 433 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 DLL4Q9NR61 685 aa7.94□□□□□ -1.14
CSMD1-216ENST00000602557 WASHC3Q9Y3C0 194 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms