RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 PITX2Q99697 317 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 COQ7Q99807 217 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 RBM4BQ9BQ04 359 aaKnown RBP6.91□□□□□ -1.3
CCDC9-206ENST00000601154 SIKE1Q9BRV8 207 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 RASSF4Q9H2L5 321 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 PRDM13Q9H4Q3 707 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 SMURF1Q9HCE7 757 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 NRIP3Q9NQ35 241 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 GID8Q9NWU2 228 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 CMTM6Q9NX76 183 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 VSX1Q9NZR4 365 aaPredicted RBP6.91□□□□□ -1.3
CCDC9-206ENST00000601154 ERVK-18Q9QC07 812 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 ATPIF1Q9UII2 106 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 SIGLEC7Q9Y286 467 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 TMEM5Q9Y2B1 443 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 RNF114Q9Y508 228 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 NOTCH1P46531 2555 aa6.91□□□□□ -1.3
CCDC9-206ENST00000601154 A0A0U1RQK1 487 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 P2RY10O00398 339 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 TNFRSF13BO14836 293 aaPredicted RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 NPPAP01160 153 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 LCATP04180 440 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 ACSM4P0C7M7 580 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 MMP9P14780 707 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 NCK1P16333 377 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 CA6P23280 308 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 PSMB10P40306 273 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 CD200P41217 278 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 CDKN2AP42771 156 aaKnown RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 GATA4P43694 442 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 RPS6KA3P51812 740 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 RAD23AP54725 363 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 FXYD6P3P58550 94 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 ARF6P62330 175 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 HIST1H3AP68431 136 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 PRB3Q04118 309 aaPredicted RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 LIPEQ05469 1076 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 POU4F2Q12837 409 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 MALLQ13021 153 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 PDCD1Q15116 288 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 OR8G1Q15617 311 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 RSPO1Q2MKA7 263 aaPredicted RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 HIST2H3PS2Q5TEC6 136 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 METTL11BQ5VVY1 283 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 GPR139Q6DWJ6 353 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 ASPHD2Q6ICH7 369 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 DNM1P34Q6PK57 102 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 HIST2H3AQ71DI3 136 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 PGAP1Q75T13 922 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 MRPL21Q7Z2W9 205 aaKnown RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 NAA40Q86UY6 237 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 CYP4Z1Q86W10 505 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 LNX2Q8N448 690 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 TMEM86BQ8N661 226 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 SCCPDHQ8NBX0 429 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 FAM156AQ8NDB6 213 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 LINC01006Q8NI28 216 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 FAM110DQ8TAY7 271 aaPredicted RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 TBC1D15Q8TC07 691 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 Q8TCH9 128 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 SLC7A13Q8TCU3 470 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 WDFY2Q96P53 400 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 ERMAPQ96PL5 475 aaPredicted RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 ADAT1Q9BUB4 502 aaKnown RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 SEMA6AQ9H2E6 1030 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 FN3KQ9H479 309 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 FN3KRPQ9HA64 309 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 TCF7L1Q9HCS4 588 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 SRA1Q9HD15 236 aaKnown RBP6.9□□□□□ -1.3
CCDC9-206ENST00000601154 SAR1AQ9NR31 198 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 ACOXLQ9NUZ1 547 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 ARMCX1Q9P291 453 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 RNF7Q9UBF6 113 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 DNAJB11Q9UBS4 358 aa6.9□□□□□ -1.3
CCDC9-206ENST00000601154 IGHV3OR15-7A0A075B7D8 119 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 IGLV1-36A0A0B4J1U3 117 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 IGHV1-69DA0A0B4J2H0 117 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 TRBV4-1A0A0J9YWV2 114 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 hCG_1807616A0A1W2PRN6 198 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 UNC119BA6NIH7 251 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 SLC22A31A6NKX4 558 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 A6NLC8 198 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
CCDC9-206ENST00000601154 LGALS8O00214 317 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 NME4O00746 187 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 PTP4A3O75365 173 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 DIRAS1O95057 198 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 FSTL3O95633 263 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 IGHV1-69P01742 117 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 HLA-DQA2P01906 255 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 GYPAP02724 150 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 H1F0P07305 194 aaKnown RBP6.89□□□□□ -1.31
CCDC9-206ENST00000601154 TROVE2P10155 538 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC9-206ENST00000601154 ANOS1P23352 680 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 CRABP1P29762 137 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 MDH1P40925 334 aaKnown RBP6.89□□□□□ -1.31
CCDC9-206ENST00000601154 RPS27P42677 84 aaKnown RBP6.89□□□□□ -1.31
CCDC9-206ENST00000601154 NPY4RP50391 375 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 SLC7A2P52569 658 aa6.89□□□□□ -1.31
CCDC9-206ENST00000601154 BPIFB3P59826 476 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms