RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 HSD17B1P14061 328 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 GGT2P36268 569 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 IFNGR2P38484 337 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 PMELP40967 661 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 GSSP48637 474 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 DBPQ10586 325 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-204ENST00000601038 BAMBIQ13145 260 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 ZNF404Q494X3 552 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 C9orf139Q6ZV77 190 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 NLRC3Q7RTR2 1065 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 NAA40Q86UY6 237 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 ERGIC1Q969X5 290 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 MCUR1Q96AQ8 359 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 DACT3Q96B18 629 aaPredicted RBP14.21□□□□□ -0.13
SCAF1-204ENST00000601038 UPRTQ96BW1 309 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 DUX5Q96PT3 197 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 PNRC2Q9NPJ4 139 aaKnown RBP14.21□□□□□ -0.13
SCAF1-204ENST00000601038 MAGEL2Q9UJ55 1249 aa14.21□□□□□ -0.13
SCAF1-204ENST00000601038 HLA-DQA2P01906 255 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 LCATP04180 440 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 MTNR1AP48039 350 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 TRAP1Q12931 704 aaKnown RBP14.2□□□□□ -0.14
SCAF1-204ENST00000601038 MALLQ13021 153 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 MAB21L1Q13394 359 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 FAM201AQ5SY85 155 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 SHISA2Q6UWI4 295 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 PARP8Q8N3A8 854 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 OR8B3Q8NGG8 313 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 Q8TCH9 128 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 SLC25A28Q96A46 364 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 OR8B2Q96RD0 313 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 IL1RAPQ9NPH3 570 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 KCNG2Q9UJ96 466 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 TMCC3Q9ULS5 477 aa14.2□□□□□ -0.14
SCAF1-204ENST00000601038 KIR2DS1A0A191URI9 304 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 PLATP00750 562 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 FABP3P05413 133 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 RNASE1P07998 156 aaKnown RBP14.19□□□□□ -0.14
SCAF1-204ENST00000601038 IGHV4-38-2P0DP08 117 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 IRF2P14316 349 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 RRM2P31350 389 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 CD200P41217 278 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 PITPNBP48739 271 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 TPTEP56180 551 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 PRSS12P56730 875 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 TSPAN31Q12999 210 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 ZNF620Q6ZNG0 422 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 PGAP1Q75T13 922 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 SDR9C7Q8NEX9 313 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 GNPDA2Q8TDQ7 276 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 SLCO4A1Q96BD0 722 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 NSMCE2Q96MF7 247 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 NSRP1Q9H0G5 558 aaKnown RBP14.19□□□□□ -0.14
SCAF1-204ENST00000601038 FN3KQ9H479 309 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 MRPL22Q9NWU5 206 aaKnown RBP14.19□□□□□ -0.14
SCAF1-204ENST00000601038 CD300AQ9UGN4 299 aa14.19□□□□□ -0.14
SCAF1-204ENST00000601038 TMPRSS2O15393 492 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 ZNF823P16415 610 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 RAD23AP54725 363 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.18□□□□□ -0.14
SCAF1-204ENST00000601038 SLC9A3R2Q15599 337 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 SAMD4BQ5PRF9 694 aaKnown RBP14.18□□□□□ -0.14
SCAF1-204ENST00000601038 PRR31Q5SQ13 230 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 SLC35F1Q5T1Q4 408 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 DCDC5Q6ZRR9 648 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 PGAM4Q8N0Y7 254 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 OR11L1Q8NGX0 322 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 SPRYD4Q8WW59 207 aaPredicted RBP14.18□□□□□ -0.14
SCAF1-204ENST00000601038 MAP6Q96JE9 813 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 SLC22A4Q9H015 551 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 CLN8Q9UBY8 286 aa14.18□□□□□ -0.14
SCAF1-204ENST00000601038 NOP16Q9Y3C1 178 aaKnown RBP14.18□□□□□ -0.14
SCAF1-204ENST00000601038 IGHV3OR16-10A0A075B7F0 116 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 M0R135 149 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 PHYHO14832 338 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 ARPC2O15144 300 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 SNX3O60493 162 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 FAM20BO75063 409 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 MSX2P35548 267 aaPredicted RBP14.17□□□□□ -0.14
SCAF1-204ENST00000601038 HMGA2P52926 109 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 CLEC12AQ5QGZ9 265 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 WDR25Q64LD2 544 aaPredicted RBP14.17□□□□□ -0.14
SCAF1-204ENST00000601038 RPL13AP3Q6NVV1 102 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 PGBD2Q6P3X8 592 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 LYPD2Q6UXB3 125 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 MRPL21Q7Z2W9 205 aaKnown RBP14.17□□□□□ -0.14
SCAF1-204ENST00000601038 OR10S1Q8NGN2 331 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 SPTSSAQ969W0 71 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 ZNF799Q96GE5 643 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 CDRT15Q96T59 188 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 DDOQ99489 341 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 NUDT16L1Q9BRJ7 211 aaKnown RBP14.17□□□□□ -0.14
SCAF1-204ENST00000601038 ZNF696Q9H7X3 374 aa14.17□□□□□ -0.14
SCAF1-204ENST00000601038 TRAV40A0A0B4J280 105 aa14.16□□□□□ -0.14
SCAF1-204ENST00000601038 CD300LBA8K4G0 201 aa14.16□□□□□ -0.14
SCAF1-204ENST00000601038 GMDSO60547 372 aa14.16□□□□□ -0.14
SCAF1-204ENST00000601038 KRT36O76013 467 aa14.16□□□□□ -0.14
SCAF1-204ENST00000601038 CA6P23280 308 aa14.16□□□□□ -0.14
SCAF1-204ENST00000601038 PSMB10P40306 273 aa14.16□□□□□ -0.14
SCAF1-204ENST00000601038 IL13RA1P78552 427 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms