RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PLEKHA6Q9Y2H5 1048 aa17.98■□□□□ 0.47
SHKBP1-225ENST00000600733 TRBV11-1A0A0K0K1C0 115 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 ZNF208O43345 1280 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 MGMTP16455 207 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 ZBTB25P24278 435 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 AGTR1P30556 359 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 CD96P40200 585 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC25A42Q86VD7 318 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC22A24Q8N4F4 322 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 GPN3Q9UHW5 284 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 TIAF1O95411 115 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 HEXBP07686 556 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 GIMD1P0DJR0 217 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 CAPZA1P52907 286 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 FGL1Q08830 312 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 MYBPHQ13203 477 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 COL19A1Q14993 1142 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 INPP5JQ15735 1006 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 JMJD6Q6NYC1 403 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 RHOUQ7L0Q8 258 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 LYG2Q86SG7 212 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 OR51E1Q8TCB6 317 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 PPP1R1CQ8WVI7 109 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 SOX7Q9BT81 388 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 SELENOIQ9C0D9 397 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 TGIF2Q9GZN2 237 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 SEC61A2Q9H9S3 476 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 ALKBH4Q9NXW9 302 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 B3GALT5Q9Y2C3 310 aa17.97■□□□□ 0.47
SHKBP1-225ENST00000600733 OR2AT4A6NND4 320 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 FAM25EA8MYX2 175 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 D6RAR5 112 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 STK17BO94768 372 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 DCNP07585 359 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 SLC2A1P11166 492 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 ATF4P18848 351 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 BCKDHBP21953 392 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 CDAP32320 146 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 ATP1B3P54709 279 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 FOXK1P85037 733 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 MFAP5Q13361 173 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 RHBDD2Q6NTF9 364 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 C11orf87Q6NUJ2 197 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 HSD17B13Q7Z5P4 300 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 NICN1Q9BSH3 213 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 ZNF768Q9H5H4 540 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 TNFSF18Q9UNG2 199 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 RPH3AQ9Y2J0 694 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 A0A0D9SG52 128 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 BPNT1O95861 308 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 UBBP0CG47 229 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 ANOS1P23352 680 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 AVPR2P30518 371 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 SUMO3P55854 103 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 RPS27AP62979 156 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 UBA52P62987 128 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 SRSF4Q08170 494 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 AWAT2Q6E213 333 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 LPCAT3Q6P1A2 487 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 ANGPTL5Q86XS5 388 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 ADAD2Q8NCV1 583 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 OR5D14Q8NGL3 314 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 ZNF75AQ96N20 296 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 MRPL13Q9BYD1 178 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 IFT46Q9NQC8 304 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 COMMD9Q9P000 198 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 KCNK7Q9Y2U2 307 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 LHFPL6Q9Y693 200 aa17.96■□□□□ 0.47
SHKBP1-225ENST00000600733 C9orf170A2RU37 121 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 RAB3AP20336 220 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 LAP3P28838 519 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 LUMP51884 338 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 IL13RA1P78552 427 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 PTCRAQ6ISU1 281 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 WDR74Q6RFH5 385 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 KCNRGQ8N5I3 272 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 CASTOR1Q8WTX7 329 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 CYYR1Q96J86 154 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 VRK1Q99986 396 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 UQCC2Q9BRT2 126 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 PPP4R1LQ9P1A2 415 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 KLHL13Q9P2N7 655 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 POLR1DQ9Y2S0 133 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 RNF222A6NCQ9 220 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 SSX5O60225 188 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 ABOP16442 354 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 IGFBP4P22692 258 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 VAMP1P23763 118 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 ZNF93P35789 620 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 ZNF41P51814 821 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 PRKXP51817 358 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 NKAIN1Q4KMZ8 207 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 CARD17Q5XLA6 110 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 KMT5CQ86Y97 462 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 PXT1Q8NFP0 134 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 OR2I1PQ8NGU4 316 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 NUBPLQ8TB37 319 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 SLC25A32Q9H2D1 315 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 FN3KRPQ9HA64 309 aa17.95■□□□□ 0.46
SHKBP1-225ENST00000600733 ADAMTS9Q9P2N4 1935 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms