RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 HSD17B12Q53GQ0 312 aa20.33■□□□□ 0.85
SYMPK-212ENST00000598896 OR51E1Q8TCB6 317 aa20.33■□□□□ 0.85
SYMPK-212ENST00000598896 PHYHIPQ92561 330 aa20.33■□□□□ 0.85
SYMPK-212ENST00000598896 SFXN3Q9BWM7 321 aa20.33■□□□□ 0.85
SYMPK-212ENST00000598896 B3GNT2Q9NY97 397 aa20.33■□□□□ 0.85
SYMPK-212ENST00000598896 HHLA2Q9UM44 414 aa20.33■□□□□ 0.85
SYMPK-212ENST00000598896 TRBV5-7A0A0A0MS05 114 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 ACHEP22303 614 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 MYL9P24844 172 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 RORCP51449 518 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 ZNF404Q494X3 552 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 ZNF584Q8IVC4 421 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 MCFD2Q8NI22 146 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 SOX7Q9BT81 388 aa20.33■□□□□ 0.84
SYMPK-212ENST00000598896 NXF2Q9GZY0 626 aaKnown RBP20.33■□□□□ 0.84
SYMPK-212ENST00000598896 A0A0G2JNJ9 132 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 A0A1B0GTI1 187 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 CIB4A0PJX0 185 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 LMX1BO60663 402 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 MAPK3P27361 379 aaPredicted RBP20.32■□□□□ 0.84
SYMPK-212ENST00000598896 APEX1P27695 318 aaKnown RBP20.32■□□□□ 0.84
SYMPK-212ENST00000598896 SOX6P35712 828 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 OR10A3P58181 314 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 SNAI3Q3KNW1 292 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 TMEM244Q5VVB8 128 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 ASPHD2Q6ICH7 369 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 CXorf67Q86X51 503 aaPredicted RBP20.32■□□□□ 0.84
SYMPK-212ENST00000598896 Q9UFV3 132 aa20.32■□□□□ 0.84
SYMPK-212ENST00000598896 LOC100509620A0A075B734 347 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 TRAV1-2A0A0B4J238 106 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 A0A1W2PR80 420 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 UBL3O95164 117 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 SRMP19623 302 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 ARR3P36575 388 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 GSG1Q2KHT4 349 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 ZNF474Q6S9Z5 364 aaPredicted RBP20.31■□□□□ 0.84
SYMPK-212ENST00000598896 DRAM2Q6UX65 266 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 KCNS3Q9BQ31 491 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 PLEKHB1Q9UF11 243 aaPredicted RBP20.31■□□□□ 0.84
SYMPK-212ENST00000598896 DHDHQ9UQ10 334 aa20.31■□□□□ 0.84
SYMPK-212ENST00000598896 TRAV8-7A0A075B6U6 113 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 TPTEP56180 551 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 MDP1Q86V88 176 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 ST6GALNAC3Q8NDV1 305 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 PGAM5Q96HS1 289 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 ZNF75AQ96N20 296 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 ATPIF1Q9UII2 106 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 APOC1P02654 83 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 GFOD2Q3B7J2 385 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 BEND4Q6ZU67 534 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 LUZP2Q86TE4 346 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 OR13C3Q8NGS6 347 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 BOD1Q96IK1 185 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 GPR84Q9NQS5 396 aa20.3■□□□□ 0.84
SYMPK-212ENST00000598896 A0A0G2JK05 382 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 SYT7O43581 403 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 IGLV3-1P01715 115 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 RAF1P04049 648 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 CCL2P13500 99 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 BMP5P22003 454 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 CEP78Q5JTW2 689 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 TMEM53Q6P2H8 277 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 DPPA2Q7Z7J5 298 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 TPRA1Q86W33 373 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 C1orf162Q8NEQ5 155 aaPredicted RBP20.29■□□□□ 0.84
SYMPK-212ENST00000598896 NANOS1Q8WY41 292 aaKnown RBP20.29■□□□□ 0.84
SYMPK-212ENST00000598896 MS4A3Q96HJ5 214 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 LYZL4Q96KX0 146 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 SLC30A2Q9BRI3 323 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 C6orf62Q9GZU0 229 aaPredicted RBP20.29■□□□□ 0.84
SYMPK-212ENST00000598896 USP24Q9UPU5 2620 aa20.29■□□□□ 0.84
SYMPK-212ENST00000598896 TBX1O43435 398 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 PAX7P23759 505 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 STOMP27105 288 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 BMXP51813 675 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 P2RY6Q15077 328 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 COMMD2Q86X83 199 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 GFI1Q99684 422 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 MMP27Q9H306 513 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 CXorf56Q9H5V9 222 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 A3GALT2U3KPV4 340 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 COX5BP10606 129 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 CCL1P22362 96 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 STAC2Q6ZMT1 411 aa20.28■□□□□ 0.84
SYMPK-212ENST00000598896 AK6Q9Y3D8 172 aaKnown RBP20.28■□□□□ 0.84
SYMPK-212ENST00000598896 A0A1B0GVI7 797 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 ADRA2CP18825 462 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 RAB3BP20337 219 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 OPRM1P35372 400 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 UBE2NP61088 152 aaKnown RBP20.27■□□□□ 0.84
SYMPK-212ENST00000598896 MYPOPQ86VE0 399 aaPredicted RBP20.27■□□□□ 0.84
SYMPK-212ENST00000598896 WDR31Q8NA23 367 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 OR6Q1Q8NGQ2 317 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 THRSPQ92748 146 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 FAM71F1Q96KD3 344 aaPredicted RBP20.27■□□□□ 0.84
SYMPK-212ENST00000598896 POM121L2Q96KW2 1035 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 DMRTA2Q96SC8 542 aa20.27■□□□□ 0.84
SYMPK-212ENST00000598896 ZNF275Q9NSD4 429 aaPredicted RBP20.27■□□□□ 0.84
SYMPK-212ENST00000598896 TRGV8A0A0C4DH27 118 aa20.26■□□□□ 0.83
SYMPK-212ENST00000598896 A0A0U1RQV5 110 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms