RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 KALRNO60229 2985 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 TRDV1A0A1B0GX56 115 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 A0A1W2PR80 420 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 C5orf49A4QMS7 147 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 ZFPL1O95159 310 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 ACSM4P0C7M7 580 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 PPP3CBP16298 524 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 ACHEP22303 614 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 UGT2B10P36537 528 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 UQCRFS1P47985 274 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 FAM27E3Q08E93 113 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 CD200R1LQ6Q8B3 271 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 SLC16A12Q6ZSM3 486 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 SLC30A7Q8NEW0 376 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 GPR148Q8TDV2 347 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 CA5BP1Q8WTZ4 195 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 SLC7A6Q92536 515 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 NAA50Q9GZZ1 169 aaKnown RBP13.44□□□□□ -0.26
UPF1-206ENST00000598471 OR10A2Q9H208 303 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 CDH20Q9HBT6 801 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 SLC22A13Q9Y226 551 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 N6AMT1Q9Y5N5 214 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 SLC25A15Q9Y619 301 aa13.44□□□□□ -0.26
UPF1-206ENST00000598471 A0A1B0GVI7 797 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 FAM90A27PA6NNH2 459 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 J3QKU1 62 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 GABRPO00591 440 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 SLC22A1O15245 554 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 TBX1O43435 398 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 GATBO75879 557 aaKnown RBP13.43□□□□□ -0.26
UPF1-206ENST00000598471 LCATP04180 440 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 ISG15P05161 165 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 SLC2A1P11166 492 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 ZNF14P17017 642 aaPredicted RBP13.43□□□□□ -0.26
UPF1-206ENST00000598471 CCNOP22674 350 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 MAPK3P27361 379 aaPredicted RBP13.43□□□□□ -0.26
UPF1-206ENST00000598471 CRYBB2P43320 205 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 IDH3GP51553 393 aaPredicted RBP13.43□□□□□ -0.26
UPF1-206ENST00000598471 PPA1Q15181 289 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 ODF4Q2M2E3 257 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 RSPO1Q2MKA7 263 aaPredicted RBP13.43□□□□□ -0.26
UPF1-206ENST00000598471 FBXL19-AS1Q494R0 122 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 COMMD2Q86X83 199 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 OR8B12Q8NGG6 310 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 ABHD4Q8TB40 342 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 TSEN15Q8WW01 171 aaKnown RBP13.43□□□□□ -0.26
UPF1-206ENST00000598471 PHYHIPQ92561 330 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 POM121L2Q96KW2 1035 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 KCNJ16Q9NPI9 418 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 HHLA2Q9UM44 414 aa13.43□□□□□ -0.26
UPF1-206ENST00000598471 CACNA1CQ13936 2221 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 A0A0U1RQV5 110 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 LOC107986453A0A1B0GWG9 222 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 H3BMQ9 156 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 GPX5O75715 221 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 IGKV3-15P01624 115 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 TTRP02766 147 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 ZNF12P17014 697 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 NR4A1P22736 598 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 FGF9P31371 208 aaPredicted RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 LSM3P62310 102 aaKnown RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 FABP5Q01469 135 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 CTF1Q16619 201 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 C3orf36Q3SXR2 165 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 ACSM3Q53FZ2 586 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 FOXB2Q5VYV0 432 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 ZNF584Q8IVC4 421 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 CCDC54Q8NEL0 328 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 KBTBD8Q8NFY9 601 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 RPL3LQ92901 407 aaKnown RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 RNASE6Q93091 150 aaKnown RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 C12orf43Q96C57 262 aaKnown RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 KCTD7Q96MP8 289 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 ZNF75AQ96N20 296 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 SLC24A3Q9HC58 644 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 TXNL4BQ9NX01 149 aaKnown RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 CRNNQ9UBG3 495 aaPredicted RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 EIF3KQ9UBQ5 218 aaKnown RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 ZNF391Q9UJN7 358 aa13.42□□□□□ -0.26
UPF1-206ENST00000598471 NCOA6Q14686 2063 aaPredicted RBP13.42□□□□□ -0.26
UPF1-206ENST00000598471 LOC100509620A0A075B734 347 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 ZNF879B4DU55 563 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 J3QW42 95 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 P2RY10O00398 339 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 XRCC2O43543 280 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 SYT7O43581 403 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 ARL6IP5O75915 188 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 AGFG2O95081 481 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 CD2P06729 351 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 OCM2P0CE71 109 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 AGAP20933 346 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 CCKARP32238 428 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 TAB1Q15750 504 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 Q499Y3 187 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 C22orf42Q6IC83 251 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 UNQ6126/PRO20091Q6UXV3 157 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 PRSS45Q7RTY3 260 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 CEACAM19Q7Z692 300 aa13.41□□□□□ -0.26
UPF1-206ENST00000598471 APOBEC3DQ96AK3 386 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms