RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 F12P00748 615 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 ANXA2P07355 339 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 SLC2A1P11166 492 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 RAC2P15153 192 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 ATP6V1E1P36543 226 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 OPRL1P41146 370 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 POU4F2Q12837 409 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 PSG7Q13046 419 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 TMED1Q13445 227 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 HLXQ14774 488 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 MEDAGQ5VYS4 303 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 KCTD18Q6PI47 426 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 LRRN1Q6UXK5 716 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 CYGBQ8WWM9 190 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 MNTQ99583 582 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 APOL4Q9BPW4 351 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 TTTY10Q9BZA0 68 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 RNPEPL1Q9HAU8 725 aa16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 CGGBP1Q9UFW8 167 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 PURGQ9UJV8 347 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.81■□□□□ 0.28
SHKBP1-214ENST00000597396 SNTNA6NMZ2 147 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 C17orf100A8MU93 164 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 ZNF670-ZNF695F2Z2N8 137 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 DLGAP1O14490 977 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 ENTPD6O75354 484 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 LY6HO94772 140 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 SBK2P0C263 348 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 OCLNQ16625 522 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 TMEM255AQ5JRV8 349 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 CLEC2AQ6UVW9 174 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 FBXW12Q6X9E4 464 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 ENTHD1Q8IYW4 607 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 DHRSXQ8N5I4 330 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 ASB17Q8WXJ9 295 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 HAVCR1Q96D42 359 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 TMUB1Q9BVT8 246 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 SP140LQ9H930 580 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 CYSLTR2Q9NS75 346 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 CLN6Q9NWW5 311 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 IKZF2Q9UKS7 526 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 COPS3Q9UNS2 423 aa16.8■□□□□ 0.28
SHKBP1-214ENST00000597396 PHYHO14832 338 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 TBX1O43435 398 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 APOL3O95236 402 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 KITLGP21583 273 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 LIPAP38571 399 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 ZNF81P51508 661 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 CXCR4P61073 352 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 SNAI3Q3KNW1 292 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 ZMAT1Q5H9K5 638 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 SLC25A30Q5SVS4 291 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 TTC23Q5W5X9 447 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 MRPL21Q7Z2W9 205 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 ZNF525Q8N782 197 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 GTF3AQ92664 365 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 MROQ9BYG7 248 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 NIPAL2Q9H841 368 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 BRD7Q9NPI1 651 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 AASSQ9UDR5 926 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 LRP12Q9Y561 859 aa16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 MAP1AP78559 2803 aaPredicted RBP16.79■□□□□ 0.28
SHKBP1-214ENST00000597396 PSMD9O00233 223 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 CSF3P09919 207 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 MTNR1AP48039 350 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 MMP15P51511 669 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 ZNF121P58317 390 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 DSCR9P59020 149 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 CARTPTQ16568 116 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 OR2T2Q6IF00 324 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 ZNF322Q6U7Q0 402 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 USP51Q70EK9 711 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 FAM57BQ71RH2 274 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 PGAP1Q75T13 922 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 OR5AS1Q8N127 324 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 PGAM5Q96HS1 289 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 Q96MT0 163 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 OR8B4Q96RC9 309 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 TBX5Q99593 518 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 RHNO1Q9BSD3 238 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 MYOZ1Q9NP98 299 aaPredicted RBP16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 NF1P21359 2839 aa16.78■□□□□ 0.28
SHKBP1-214ENST00000597396 TPD52L2O43399 206 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 XRCC2O43543 280 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 SPRY3O43610 288 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 DAOP14920 347 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 SELEP16581 610 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 GABRB1P18505 474 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 PDLIM4P50479 330 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 RIDAP52758 137 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 IL5RAQ01344 420 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 GK2Q14410 553 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 TIGD6Q17RP2 521 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 PCGF3Q3KNV8 242 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 GLYATL3Q5SZD4 288 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 DEGS2Q6QHC5 323 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 ZNF679Q8IYX0 411 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 RFLNBQ8N5W9 214 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 OR10H4Q8NGA5 316 aa16.77■□□□□ 0.28
SHKBP1-214ENST00000597396 OR2AE1Q8NHA4 323 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms