RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 POM121L2Q96KW2 1035 aa12.85□□□□□ -0.35
LIG1-214ENST00000597146 Q96M85 177 aa12.85□□□□□ -0.35
LIG1-214ENST00000597146 PPP1R3CQ9UQK1 317 aa12.85□□□□□ -0.35
LIG1-214ENST00000597146 IER3IP1Q9Y5U9 82 aa12.85□□□□□ -0.35
LIG1-214ENST00000597146 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 ZNF816-ZNF321PA0A0X1KG74 233 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 C5orf49A4QMS7 147 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 H7C1C5 153 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 SOCS2O14508 198 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 CDC42EP2O14613 210 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 AHCYL1O43865 530 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 TIMM8AO60220 97 aaPredicted RBP12.84□□□□□ -0.35
LIG1-214ENST00000597146 ZNF32P17041 273 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 CALB2P22676 271 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 NOS3P29474 1203 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 BPIFB3P59826 476 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 PPP1CBP62140 327 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 LCN6P62502 163 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 FAM27BQ5VT28 67 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 DHRS7BQ6IAN0 325 aaPredicted RBP12.84□□□□□ -0.35
LIG1-214ENST00000597146 ARL9Q6T311 187 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 Q6ZR03 302 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 DHFR2Q86XF0 187 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 ARHGAP24Q8N264 748 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 CLDN22Q8N7P3 220 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 LRRC75AQ8NAA5 344 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 AKR7LQ8NHP1 331 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 GNPDA2Q8TDQ7 276 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 PHF21AQ96BD5 680 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 SAMD8Q96LT4 415 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 ADAM18Q9Y3Q7 739 aa12.84□□□□□ -0.35
LIG1-214ENST00000597146 A0A0U1RQK1 487 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 C22orf46C9J442 243 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 SLC16A7O60669 478 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 PTP4A3O75365 173 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 KHDRBS3O75525 346 aaKnown RBP12.83□□□□□ -0.36
LIG1-214ENST00000597146 KRT36O76013 467 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 MPIG6BO95866 241 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 CST2P09228 141 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 TNFRSF1AP19438 455 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 MSR1P21757 451 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 IER3P46695 156 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 ZNF133P52736 654 aaPredicted RBP12.83□□□□□ -0.36
LIG1-214ENST00000597146 SEC23BQ15437 767 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 SLC27A4Q6P1M0 643 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 SMARCD3Q6STE5 483 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 DPY19L2P2Q6ZN68 376 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 TSEN54Q7Z6J9 526 aaKnown RBP12.83□□□□□ -0.36
LIG1-214ENST00000597146 NEIL1Q96FI4 390 aaPredicted RBP12.83□□□□□ -0.36
LIG1-214ENST00000597146 WWC2-AS2Q96NR7 200 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 ERMAPQ96PL5 475 aaPredicted RBP12.83□□□□□ -0.36
LIG1-214ENST00000597146 TBX15Q96SF7 602 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 IFT27Q9BW83 186 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 TMEM165Q9HC07 324 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 IL1RAPQ9NPH3 570 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 ACOXLQ9NUZ1 547 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 ACTR3BQ9P1U1 418 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 SIGLEC7Q9Y286 467 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 UGT2A1Q9Y4X1 527 aa12.83□□□□□ -0.36
LIG1-214ENST00000597146 IGKV1D-43A0A0B4J1Z2 117 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 TEX13CA0A0J9YWL9 993 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 PRSS37A4D1T9 235 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 TNFRSF11BO00300 401 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 GPR37O15354 613 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 CYB5R3P00387 301 aaPredicted RBP12.82□□□□□ -0.36
LIG1-214ENST00000597146 RENP00797 406 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 TNFSF4P23510 183 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 SDHAP31040 664 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 SLC6A6P31641 620 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 CFHR2P36980 270 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 OMPP47874 163 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 PITPNBP48739 271 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 ARHGDIAP52565 204 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 PSG4Q00888 419 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 PSG7Q13046 419 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 KRR1Q13601 381 aaKnown RBP12.82□□□□□ -0.36
LIG1-214ENST00000597146 HERPUD1Q15011 391 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 FAM98BQ52LJ0 330 aaKnown RBP12.82□□□□□ -0.36
LIG1-214ENST00000597146 DNM1P34Q6PK57 102 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 GDPGP1Q6ZNW5 385 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 Q6ZTK2 550 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 LDLRAD3Q86YD5 345 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 OR8B3Q8NGG8 313 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 ZNF420Q8TAQ5 688 aaPredicted RBP12.82□□□□□ -0.36
LIG1-214ENST00000597146 GATAD2BQ8WXI9 593 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 RASD2Q96D21 266 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 PLEKHA8Q96JA3 519 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 OR2V2Q96R30 315 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 OR8B2Q96RD0 313 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 TMEM246Q9BRR3 403 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 MUC13Q9H3R2 512 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 MIOXQ9UGB7 285 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 POLR1DQ9Y2S0 133 aa12.82□□□□□ -0.36
LIG1-214ENST00000597146 SCRN3Q0VDG4 424 aa12.81□□□□□ -0.36
LIG1-214ENST00000597146 TRIM25Q14258 630 aaKnown RBP12.81□□□□□ -0.36
LIG1-214ENST00000597146 RFX4Q33E94 735 aa12.81□□□□□ -0.36
LIG1-214ENST00000597146 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.81□□□□□ -0.36
LIG1-214ENST00000597146 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms