RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 DCXRQ7Z4W1 244 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 IQCF1Q8N6M8 205 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 OR2Z1Q8NG97 314 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 DNAJC9Q8WXX5 260 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 SPTSSAQ969W0 71 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 DUS3LQ96G46 650 aaKnown RBP11.03□□□□□ -0.64
USE1-207ENST00000596136 ZNF799Q96GE5 643 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 ZNF582Q96NG8 517 aaPredicted RBP11.03□□□□□ -0.64
USE1-207ENST00000596136 NARFLQ9H6Q4 476 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 ZNF665Q9H7R5 613 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 ZNF556Q9HAH1 456 aa11.03□□□□□ -0.64
USE1-207ENST00000596136 TMEFF2Q9UIK5 374 aaPredicted RBP11.03□□□□□ -0.64
USE1-207ENST00000596136 FAM183AA6NL82 134 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 IFNL4K9M1U5 179 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 MLNRO43193 412 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 IGHV2-5P01817 119 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 LCATP04180 440 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 MSMBP08118 114 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 ANPEPP15144 967 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 HNF1AP20823 631 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 PCMT1P22061 227 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 MALLQ13021 153 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 FAHD1Q6P587 224 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 TIGD4Q8IY51 512 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 OR5AS1Q8N127 324 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 PARP8Q8N3A8 854 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 ITLN1Q8WWA0 313 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 TMEM186Q96B77 213 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 RAB39BQ96DA2 213 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 SLAMF6Q96DU3 332 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 OR2V2Q96R30 315 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 SIGLEC11Q96RL6 698 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 KCNJ15Q99712 375 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 MDFIQ99750 246 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 REPIN1Q9BWE0 567 aaKnown RBP11.02□□□□□ -0.65
USE1-207ENST00000596136 MED20Q9H944 212 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 SLC25A19Q9HC21 320 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 TMEM106BQ9NUM4 274 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 DCAF16Q9NXF7 216 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 NPTNQ9Y639 398 aa11.02□□□□□ -0.65
USE1-207ENST00000596136 TRAV20A0A0B4J274 112 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 ZNF878C9JN71 531 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 TIPRLO75663 272 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 IGHV2-70P01814 119 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 SPARCP09486 303 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 SRD5A1P18405 259 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 PAICSP22234 425 aaKnown RBP11.01□□□□□ -0.65
USE1-207ENST00000596136 ANOS1P23352 680 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 POU1F1P28069 291 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 GSTT1P30711 240 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 DAPP51397 102 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 PEG10Q86TG7 708 aaKnown RBP11.01□□□□□ -0.65
USE1-207ENST00000596136 GLCCI1Q86VQ1 547 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 LRRC28Q86X40 367 aaPredicted RBP11.01□□□□□ -0.65
USE1-207ENST00000596136 CELF2-AS1Q8N7Q2 184 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 OR6K6Q8NGW6 343 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 OR51F2Q8NH61 342 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 OR5K1Q8NHB7 308 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 RNF133Q8WVZ7 376 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 MEGF10Q96KG7 1140 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 INTS14Q96SY0 518 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 GCM1Q9NP62 436 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 G6PC2Q9NQR9 355 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 TMEM100Q9NV29 134 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 HIF1ANQ9NWT6 349 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 PPP1R3CQ9UQK1 317 aa11.01□□□□□ -0.65
USE1-207ENST00000596136 ARHGAP32A7KAX9 2087 aa11□□□□□ -0.65
USE1-207ENST00000596136 PRR23D1E9PI22 279 aaPredicted RBP11□□□□□ -0.65
USE1-207ENST00000596136 H0YL77 283 aa11□□□□□ -0.65
USE1-207ENST00000596136 PRODHO43272 600 aa11□□□□□ -0.65
USE1-207ENST00000596136 FSTL3O95633 263 aa11□□□□□ -0.65
USE1-207ENST00000596136 PRR23D2P0DMB1 279 aaPredicted RBP11□□□□□ -0.65
USE1-207ENST00000596136 SLC2A5P22732 501 aa11□□□□□ -0.65
USE1-207ENST00000596136 GATA4P43694 442 aa11□□□□□ -0.65
USE1-207ENST00000596136 SLC15A1P46059 708 aa11□□□□□ -0.65
USE1-207ENST00000596136 SRP9P49458 86 aaKnown RBP11□□□□□ -0.65
USE1-207ENST00000596136 CRISP1P54107 249 aa11□□□□□ -0.65
USE1-207ENST00000596136 GRB2P62993 217 aaKnown RBP11□□□□□ -0.65
USE1-207ENST00000596136 ZNF92Q03936 586 aa11□□□□□ -0.65
USE1-207ENST00000596136 ATP6AP1Q15904 470 aa11□□□□□ -0.65
USE1-207ENST00000596136 ZNF181Q2M3W8 571 aa11□□□□□ -0.65
USE1-207ENST00000596136 SNAI3Q3KNW1 292 aa11□□□□□ -0.65
USE1-207ENST00000596136 TMEM155Q4W5P6 130 aa11□□□□□ -0.65
USE1-207ENST00000596136 IL17RELQ6ZVW7 336 aa11□□□□□ -0.65
USE1-207ENST00000596136 PGAP1Q75T13 922 aa11□□□□□ -0.65
USE1-207ENST00000596136 SHFQ7M4L6 423 aa11□□□□□ -0.65
USE1-207ENST00000596136 DPY19L4Q7Z388 723 aa11□□□□□ -0.65
USE1-207ENST00000596136 ATG16L2Q8NAA4 619 aa11□□□□□ -0.65
USE1-207ENST00000596136 SPSB4Q96A44 273 aa11□□□□□ -0.65
USE1-207ENST00000596136 COPS4Q9BT78 406 aa11□□□□□ -0.65
USE1-207ENST00000596136 ABHD6Q9BV23 337 aa11□□□□□ -0.65
USE1-207ENST00000596136 TOR3AQ9H497 397 aa11□□□□□ -0.65
USE1-207ENST00000596136 OPA3Q9H6K4 179 aa11□□□□□ -0.65
USE1-207ENST00000596136 C5orf63A6NC05 138 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 CD300LBA8K4G0 201 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 TMEM178BH3BS89 294 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 PLPP2O43688 288 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 PTBP3O95758 552 aaKnown RBP10.99□□□□□ -0.65
USE1-207ENST00000596136 APOC1P02654 83 aa10.99□□□□□ -0.65
USE1-207ENST00000596136 OPRL1P41146 370 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms