RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 POM121L2Q96KW2 1035 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 HDHD5Q9BXW7 423 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 COMMD4Q9H0A8 199 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 EXOSC4Q9NPD3 245 aaKnown RBP12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ELOVL5Q9NYP7 299 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF319Q9P2F9 582 aa12.82□□□□□ -0.36
SHKBP1-211ENST00000595945 C5orf63A6NC05 138 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 F5H5K5 113 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 GATBO75879 557 aaKnown RBP12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 IGLV3-1P01715 115 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 CBR1P16152 277 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF14P17017 642 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 ACHEP22303 614 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 APEX1P27695 318 aaKnown RBP12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 UBE2NP61088 152 aaKnown RBP12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 ACSM3Q53FZ2 586 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 C1QTNF12Q5T7M4 302 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 TMEM244Q5VVB8 128 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 COLCA1Q6ZS62 124 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 NAA40Q86UY6 237 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 OR8B12Q8NGG6 310 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 OR10AC1Q8NH08 325 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 NDNFQ8TB73 568 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 BRD7Q9NPI1 651 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 AMDHD2Q9Y303 409 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 MYO18BQ8IUG5 2567 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 HCFC1P51610 2035 aa12.81□□□□□ -0.36
SHKBP1-211ENST00000595945 TRBV5-7A0A0A0MS05 114 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 A0A1B0GTI1 187 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 EEF1E1-BLOC1S5C9J1V9 151 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 EEF1E1O43324 174 aaKnown RBP12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 SERPINA5P05154 406 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 UCHL1P09936 223 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 UBCP0CG48 685 aaKnown RBP12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 SLC2A1P11166 492 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 CCL1P22362 96 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 IL32P24001 234 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 PLP2Q04941 152 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 Q499Y3 187 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 ZMAT1Q5H9K5 638 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 C22orf42Q6IC83 251 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 Q6ZSR3 168 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 FAM57BQ71RH2 274 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 RDH10Q8IZV5 341 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 GPR148Q8TDV2 347 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 PHYHIPQ92561 330 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 OR10A4Q9H209 315 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 GTF2A1LQ9UNN4 478 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 SLC25A15Q9Y619 301 aa12.8□□□□□ -0.36
SHKBP1-211ENST00000595945 A0A0U1RQV5 110 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 A0A1B0GUH1 482 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 IQCMA0A1B0GVH7 501 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 A0A1W2PPW3 197 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 A0A1W2PR80 420 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 ZNF879B4DU55 563 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 P2RY10O00398 339 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 PIN1P1O15428 100 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 IGKV3-15P01624 115 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 ANXA2P07355 339 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 STOMP27105 288 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 PCSK6P29122 969 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 CHRNB4P30926 498 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 HOXC12P31275 282 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 CCKARP32238 428 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 TLE1Q04724 770 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 FAM27E3Q08E93 113 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 ODF4Q2M2E3 257 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 SLC25A35Q3KQZ1 300 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 FBXL19-AS1Q494R0 122 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 TIMM23BQ5SRD1 257 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 PAMR1Q6UXH9 720 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 USP43Q70EL4 1123 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 CEACAM19Q7Z692 300 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 MYPOPQ86VE0 399 aaPredicted RBP12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 FJX1Q86VR8 437 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 STEAP2Q8NFT2 490 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 KBTBD8Q8NFY9 601 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 ASB5Q8WWX0 329 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 S100PBPQ96BU1 408 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 CCDC120Q96HB5 630 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 PGAM5Q96HS1 289 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 DERL3Q96Q80 235 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 OR14A2Q96R54 314 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 PPIL3Q9H2H8 161 aaKnown RBP12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 SP140LQ9H930 580 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 GSTK1Q9Y2Q3 226 aa12.79□□□□□ -0.36
SHKBP1-211ENST00000595945 FLNCQ14315 2725 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 SHISA3A0PJX4 238 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 ICMTO60725 284 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 AGFG2O95081 481 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 CELA3BP08861 270 aa12.78□□□□□ -0.36
SHKBP1-211ENST00000595945 GNLYP22749 145 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms