RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 MUC20Q8N307 709 aaPredicted RBP14.27□□□□□ -0.13
CCDC9-202ENST00000595659 OR9Q2Q8NGE9 314 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 OR51L1Q8NGJ5 315 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 ZNRF4Q8WWF5 429 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 MAP6Q96JE9 813 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 ATF6BQ99941 703 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 TMEM246Q9BRR3 403 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 NTN4Q9HB63 628 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 IL1RAPQ9NPH3 570 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 CYB5R1Q9UHQ9 305 aa14.27□□□□□ -0.13
CCDC9-202ENST00000595659 ARHGAP32A7KAX9 2087 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 C5orf63A6NC05 138 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 A8MXK9 166 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 PPP1R8Q12972 351 aaKnown RBP14.26□□□□□ -0.13
CCDC9-202ENST00000595659 PRAMEF6Q5VXH4 476 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 CYP2R1Q6VVX0 501 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 KLBQ86Z14 1044 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 PROKR2Q8NFJ6 384 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 ZNF48Q96MX3 618 aaPredicted RBP14.26□□□□□ -0.13
CCDC9-202ENST00000595659 SSBP3Q9BWW4 388 aaPredicted RBP14.26□□□□□ -0.13
CCDC9-202ENST00000595659 UFSP2Q9NUQ7 469 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 TAGLN3Q9UI15 199 aa14.26□□□□□ -0.13
CCDC9-202ENST00000595659 IFNL4K9M1U5 179 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 IGHV4-38-2P0DP08 117 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 PSKH1P11801 424 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 ZNF823P16415 610 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 ANOS1P23352 680 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 GNB2P62879 340 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 MXRA7P84157 204 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 PAX8Q06710 450 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 ECH1Q13011 328 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 MALLQ13021 153 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 MAB21L1Q13394 359 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 AWAT1Q58HT5 328 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 LYPD2Q6UXB3 125 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 PGAP1Q75T13 922 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 OR10S1Q8NGN2 331 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 SPRYD4Q8WW59 207 aaPredicted RBP14.25□□□□□ -0.13
CCDC9-202ENST00000595659 TAF15Q92804 592 aaKnown RBP eCLIP14.25□□□□□ -0.13
CCDC9-202ENST00000595659 BTBD10Q9BSF8 475 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 LRCH1Q9Y2L9 728 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 N6AMT1Q9Y5N5 214 aa14.25□□□□□ -0.13
CCDC9-202ENST00000595659 LRRC30A6NM36 301 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 M0R135 149 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 TNFRSF11BO00300 401 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 IDH3BO43837 385 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 GASTP01350 101 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 EGR1P18146 543 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 CA6P23280 308 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 TPTEP56180 551 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 GNGT1P63211 74 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 PAX2Q02962 417 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 BAMBIQ13145 260 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 MPPED2Q15777 294 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 SNAI3Q3KNW1 292 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 DOK3Q7L591 496 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 MRPL21Q7Z2W9 205 aaKnown RBP14.24□□□□□ -0.13
CCDC9-202ENST00000595659 BOLLQ8N9W6 283 aaKnown RBP14.24□□□□□ -0.13
CCDC9-202ENST00000595659 OR8D4Q8NGM9 314 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 OR9Q1Q8NGQ5 310 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 OR2AE1Q8NHA4 323 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 NEIL1Q96FI4 390 aaPredicted RBP14.24□□□□□ -0.13
CCDC9-202ENST00000595659 ZNF799Q96GE5 643 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 DDOQ99489 341 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 MS4A7Q9GZW8 240 aaPredicted RBP14.24□□□□□ -0.13
CCDC9-202ENST00000595659 MIOXQ9UGB7 285 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 PCDHGB1Q9Y5G3 927 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 LYVE1Q9Y5Y7 322 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 CDH10Q9Y6N8 788 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 TENM1Q9UKZ4 2725 aa14.24□□□□□ -0.13
CCDC9-202ENST00000595659 DYSFO75923 2080 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 DNAJC9-AS1A6NH13 148 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 BHLHE40O14503 412 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 FAM20BO75063 409 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 IRF2P14316 349 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 ATP6V1B2P21281 511 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 ZNF92Q03936 586 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 ZNF404Q494X3 552 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 ZNF362Q5T0B9 420 aaPredicted RBP14.23□□□□□ -0.13
CCDC9-202ENST00000595659 C16orf89Q6UX73 402 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 BTNL3Q6UXE8 466 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 C1orf87Q8N0U7 546 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 SLC37A3Q8NCC5 494 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 OR8B3Q8NGG8 313 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 OR52L1Q8NGH7 329 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 RAB40AQ8WXH6 277 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 C1orf147Q96MC9 270 aaPredicted RBP14.23□□□□□ -0.13
CCDC9-202ENST00000595659 OR8B2Q96RD0 313 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 CENPMQ9NSP4 180 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 ARL2BPQ9Y2Y0 163 aa14.23□□□□□ -0.13
CCDC9-202ENST00000595659 IGHV2-70DA0A0C4DH43 119 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 A0A1B0GWJ7 208 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 CD300LBA8K4G0 201 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 ATP8B1O43520 1251 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 KRT36O76013 467 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 GYPBP06028 91 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 SPARCP09486 303 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 SLC2A1P11166 492 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 PRTN3P24158 256 aa14.22□□□□□ -0.13
CCDC9-202ENST00000595659 PITPNBP48739 271 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms