RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 DCXRQ7Z4W1 244 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 SPICQ8N5J4 248 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 ZNF283Q8N7M2 679 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 ATG16L2Q8NAA4 619 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 OR51L1Q8NGJ5 315 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 COPS4Q9BT78 406 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 CADM1Q9BY67 442 aaKnown RBP15.02■□□□□ -0
SHKBP1-204ENST00000594862 SLC22A4Q9H015 551 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 SP140LQ9H930 580 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 TMEM106BQ9NUM4 274 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 KIF17Q9P2E2 1029 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 PPP1R3CQ9UQK1 317 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 NPTNQ9Y639 398 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 CACNG2Q9Y698 323 aa15.02■□□□□ -0
SHKBP1-204ENST00000594862 CUBNO60494 3623 aa15.02□□□□□ -0.01
SHKBP1-204ENST00000594862 ISPDA4D126 451 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 IGHV2-5P01817 119 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 POU1F1P28069 291 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 GRB2P62993 217 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 GK2Q14410 553 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 RSPO1Q2MKA7 263 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 OR2T2Q6IF00 324 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 SHQ1Q6PI26 577 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 RHOUQ7L0Q8 258 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 SHFQ7M4L6 423 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 SLAMF6Q96DU3 332 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 PLEKHA8Q96JA3 519 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 OR2V2Q96R30 315 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 INTS14Q96SY0 518 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 KCNJ15Q99712 375 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 SLC30A2Q9BRI3 323 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 TOR3AQ9H497 397 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 WDR76Q9H967 626 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 TMEM100Q9NV29 134 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 HIF1ANQ9NWT6 349 aa15.01□□□□□ -0.01
SHKBP1-204ENST00000594862 ANK3Q12955 4377 aaKnown RBP15□□□□□ -0.01
SHKBP1-204ENST00000594862 A0A1B0GWJ7 208 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 LRRC30A6NM36 301 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 FAM157AC9JC47 383 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 PRR23D1E9PI22 279 aaPredicted RBP15□□□□□ -0.01
SHKBP1-204ENST00000594862 ZNF593O00488 134 aaPredicted RBP15□□□□□ -0.01
SHKBP1-204ENST00000594862 WNT9BO14905 357 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 PRODHO43272 600 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 GLCEO94923 617 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 GYPBP06028 91 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 PRR23D2P0DMB1 279 aaPredicted RBP15□□□□□ -0.01
SHKBP1-204ENST00000594862 GATA3P23771 443 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 CPT2P23786 658 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 GSTT1P30711 240 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 SRP14P37108 136 aaKnown RBP15□□□□□ -0.01
SHKBP1-204ENST00000594862 GINS1Q14691 196 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 TMEM155Q4W5P6 130 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 TMEM179BQ7Z7N9 219 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 OR5AS1Q8N127 324 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 MUC20Q8N307 709 aaPredicted RBP15□□□□□ -0.01
SHKBP1-204ENST00000594862 IQCF1Q8N6M8 205 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 CELF2-AS1Q8N7Q2 184 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 OR10S1Q8NGN2 331 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 SPRYD4Q8WW59 207 aaPredicted RBP15□□□□□ -0.01
SHKBP1-204ENST00000594862 ITLN1Q8WWA0 313 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 PRRG3Q9BZD7 231 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 MARCH7Q9H992 704 aa15□□□□□ -0.01
SHKBP1-204ENST00000594862 J3QLI3 93 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 XRCC2O43543 280 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 FCGR1AP12314 374 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ERFP50548 548 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 RAD23AP54725 363 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ZNF181Q2M3W8 571 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 LINC01590Q5TEZ4 76 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 CXXC5Q7LFL8 322 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 C1orf87Q8N0U7 546 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 KLHL36Q8N4N3 616 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ZNF454Q8N9F8 522 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ZNF511Q8NB15 262 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 SPATA3Q8NHX4 192 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ST7LQ8TDW4 575 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ZNRF4Q8WWF5 429 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 TMEM158Q8WZ71 300 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ERGIC1Q969X5 290 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 OTULINQ96BN8 352 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 SLC25A19Q9HC21 320 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 PAPOLBQ9NRJ5 636 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 ENOPH1Q9UHY7 261 aa14.99□□□□□ -0.01
SHKBP1-204ENST00000594862 A0A0G2JMP0 313 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 A0A0X1KG70 313 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 PNPP00491 289 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 IGHV2-70P01814 119 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 CLUP10909 449 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 HSD11B1P28845 292 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 RPS27P42677 84 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 MMP16P51512 607 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 BTG1P62324 171 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 DBPQ10586 325 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 EIF2B1Q14232 305 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 SLC35D3Q5M8T2 416 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 C1orf146Q5VVC0 180 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 LYPD4Q6UWN0 246 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 ERI1Q8IV48 349 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 PARP8Q8N3A8 854 aa14.98□□□□□ -0.01
SHKBP1-204ENST00000594862 BHLHE23Q8NDY6 225 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms