RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 AHRRA9YTQ3 701 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 EEF1E1O43324 174 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 B4GALT1P15291 398 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 NR4A2P43354 598 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 RIDAP52758 137 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 ENDOGQ14249 297 aaKnown RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 HSPB2Q16082 182 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 YIF1BQ5BJH7 314 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 ATAD3CQ5T2N8 411 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 HES5Q5TA89 166 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 ZNF433Q8N7K0 673 aaPredicted RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 OR6F1Q8NGZ6 308 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 OR5AK2Q8NH90 309 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 ZNF671Q8TAW3 534 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 SLAMF6Q96DU3 332 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 DERL3Q96Q80 235 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 KCNJ15Q99712 375 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 FOXB1Q99853 325 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 THAP7Q9BT49 309 aaPredicted RBP11.61□□□□□ -0.55
VRK3-205ENST00000593919 C12orf49Q9H741 205 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 CENPMQ9NSP4 180 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 FRRS1LQ9P0K9 344 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 ABRACLQ9P1F3 81 aa11.61□□□□□ -0.55
VRK3-205ENST00000593919 OR6C65A6NJZ3 312 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 H3BSH0 61 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 RER1O15258 196 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 SS18L1O75177 396 aaPredicted RBP11.6□□□□□ -0.55
VRK3-205ENST00000593919 SOX2P48431 317 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 MRPL28Q13084 256 aaKnown RBP11.6□□□□□ -0.55
VRK3-205ENST00000593919 TBRG1Q3YBR2 411 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 ZNF100Q8IYN0 542 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 C9orf106Q8NAJ2 232 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 LGALS14Q8TCE9 139 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 HAVCR2Q8TDQ0 301 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 ZC3HAV1LQ96H79 300 aaKnown RBP11.6□□□□□ -0.55
VRK3-205ENST00000593919 ABHD1Q96SE0 405 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 GFI1Q99684 422 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 NPDC1Q9NQX5 325 aaPredicted RBP11.6□□□□□ -0.55
VRK3-205ENST00000593919 GLRX2Q9NS18 164 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 FBXL3Q9UKT7 428 aa11.6□□□□□ -0.55
VRK3-205ENST00000593919 ZNF587BE7ETH6 402 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PDCD5O14737 125 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PNPP00491 289 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 TPOP07202 933 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 GUSBP1Q15486 140 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 ODF4Q2M2E3 257 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 FAM27BQ5VT28 67 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PYHIN1Q6K0P9 492 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 DEGS2Q6QHC5 323 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 OR2G2Q8NGZ5 317 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 SVIPQ8NHG7 77 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PHYHIPQ92561 330 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 WNT2BQ93097 391 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 TRIM63Q969Q1 353 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 ZCCHC4Q9H5U6 513 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PNRC2Q9NPJ4 139 aaKnown RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 DDX28Q9NUL7 540 aaKnown RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 UPB1Q9UBR1 384 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 MRPS7Q9Y2R9 242 aaKnown RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 PCNX1Q96RV3 2341 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 ZNF878C9JN71 531 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 RPL36A-HNRNPH2H7BZ11 118 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 ZNF254O75437 659 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 H2BFMP0C1H6 154 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 FAM157BP0CG42 384 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 FOXG1P55316 489 aaPredicted RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 MFGE8Q08431 387 aaPredicted RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 GPR176Q14439 515 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PRR30Q53SZ7 412 aaPredicted RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 C9orf135Q5VTT2 229 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 NSUN5P2Q63ZY6 315 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 CD163Q86VB7 1156 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 IZUMO1Q8IYV9 350 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PRSS35Q8N3Z0 413 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 ZNF676Q8N7Q3 588 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 UPRTQ96BW1 309 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 SNRNP40Q96DI7 357 aaKnown RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 FBXO17Q96EF6 278 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 DMRTB1Q96MA1 342 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 PRORYQ9H606 182 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 NEK6Q9HC98 313 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 NUFIP1Q9UHK0 495 aaKnown RBP11.59□□□□□ -0.55
VRK3-205ENST00000593919 PRSS50Q9UI38 385 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 SPATA2Q9UM82 520 aa11.59□□□□□ -0.55
VRK3-205ENST00000593919 TMEM8BA6NDV4 472 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 ANKRD61A6NGH8 418 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 SRSF10O75494 262 aaKnown RBP11.58□□□□□ -0.56
VRK3-205ENST00000593919 SRP9P49458 86 aaKnown RBP11.58□□□□□ -0.56
VRK3-205ENST00000593919 FAPQ12884 760 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 TATDN3Q17R31 274 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 Q499Y3 187 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 WDR38Q5JTN6 314 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 FDX2Q6P4F2 183 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 KLHL24Q6TFL4 600 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 ZNF813Q6ZN06 617 aa11.58□□□□□ -0.56
VRK3-205ENST00000593919 RHOUQ7L0Q8 258 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms