RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 ATF6BQ99941 703 aa17.11■□□□□ 0.33
TRIM47-207ENST00000593089 ARPC3O15145 178 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 OR10H3O60404 316 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 LCATP04180 440 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 IRF2P14316 349 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 NOS3P29474 1203 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 MTNR1AP48039 350 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 PITPNBP48739 271 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 SMIM11AP58511 58 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 MAB21L1Q13394 359 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 SLC9A3R2Q15599 337 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 LYPD2Q6UXB3 125 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 NLRC3Q7RTR2 1065 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 C19orf18Q8NEA5 215 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 SDR9C7Q8NEX9 313 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 TAF15Q92804 592 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRIM47-207ENST00000593089 UPRTQ96BW1 309 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 PYURFQ96I23 114 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 ELAC2Q9BQ52 826 aaKnown RBP17.1■□□□□ 0.33
TRIM47-207ENST00000593089 MYLK2Q9H1R3 596 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 GORASP2Q9H8Y8 452 aa17.1■□□□□ 0.33
TRIM47-207ENST00000593089 A0A1B0GWJ7 208 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 OR6C68A6NDL8 312 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 PLATP00750 562 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 SEMG1P04279 462 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 PPIAL4GP0DN37 164 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 TRAP1Q12931 704 aaKnown RBP17.09■□□□□ 0.33
TRIM47-207ENST00000593089 MALLQ13021 153 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 PRAMEF6Q5VXH4 476 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 ZBTB46Q86UZ6 589 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 DACT3Q96B18 629 aaPredicted RBP17.09■□□□□ 0.33
TRIM47-207ENST00000593089 NUDT16L1Q9BRJ7 211 aaKnown RBP17.09■□□□□ 0.33
TRIM47-207ENST00000593089 UNKLQ9H9P5 680 aaKnown RBP17.09■□□□□ 0.33
TRIM47-207ENST00000593089 UFSP2Q9NUQ7 469 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 CLN8Q9UBY8 286 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 CYB5R1Q9UHQ9 305 aa17.09■□□□□ 0.33
TRIM47-207ENST00000593089 MDFIC2A0A1B0GVS7 189 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 FAM20BO75063 409 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 GGT2P36268 569 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 GATA4P43694 442 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 ECH1Q13011 328 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 PRR31Q5SQ13 230 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 SLC35F1Q5T1Q4 408 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 C9orf139Q6ZV77 190 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 PGAP1Q75T13 922 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 OR11L1Q8NGX0 322 aa17.08■□□□□ 0.32
TRIM47-207ENST00000593089 SPRYD4Q8WW59 207 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-207ENST00000593089 PNRC2Q9NPJ4 139 aaKnown RBP17.08■□□□□ 0.32
TRIM47-207ENST00000593089 KIR2DS1A0A191URI9 304 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 CLDN34H7C241 214 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 FSTL3O95633 263 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 PRDX6P30041 224 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 RRM2P31350 389 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 MSX2P35548 267 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-207ENST00000593089 CD200P41217 278 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 TPTEP56180 551 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 HOXA4Q00056 320 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-207ENST00000593089 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRIM47-207ENST00000593089 WDR25Q64LD2 544 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-207ENST00000593089 BRD3OSQ6XYD6 125 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 DCDC5Q6ZRR9 648 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 MRPL21Q7Z2W9 205 aaKnown RBP17.07■□□□□ 0.32
TRIM47-207ENST00000593089 FITM2Q8N6M3 262 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 CELF2-AS1Q8N7Q2 184 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 Q8TCH9 128 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 MCUR1Q96AQ8 359 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 MAP6Q96JE9 813 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 NSRP1Q9H0G5 558 aaKnown RBP17.07■□□□□ 0.32
TRIM47-207ENST00000593089 ZNF696Q9H7X3 374 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 MRPL22Q9NWU5 206 aaKnown RBP17.07■□□□□ 0.32
TRIM47-207ENST00000593089 MAGEL2Q9UJ55 1249 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 TMCC3Q9ULS5 477 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 MGAM2Q2M2H8 2515 aa17.07■□□□□ 0.32
TRIM47-207ENST00000593089 M0R135 149 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 IDH3BO43837 385 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 FABP3P05413 133 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 ZNF823P16415 610 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 CA6P23280 308 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 IFNGR2P38484 337 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 RPS27P42677 84 aaKnown RBP17.06■□□□□ 0.32
TRIM47-207ENST00000593089 GSSP48637 474 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 RAD23AP54725 363 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 FGF12P61328 243 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 IL13RA1P78552 427 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 OR8G1Q15617 311 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 MPPED2Q15777 294 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 CLEC12AQ5QGZ9 265 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 OR10S1Q8NGN2 331 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 GNPDA2Q8TDQ7 276 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 ERGIC1Q969X5 290 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 ZNF799Q96GE5 643 aa17.06■□□□□ 0.32
TRIM47-207ENST00000593089 PHYHO14832 338 aa17.05■□□□□ 0.32
TRIM47-207ENST00000593089 PYCR1P32322 319 aa17.05■□□□□ 0.32
TRIM47-207ENST00000593089 SNAI3Q3KNW1 292 aa17.05■□□□□ 0.32
TRIM47-207ENST00000593089 ZNF841Q6ZN19 808 aa17.05■□□□□ 0.32
TRIM47-207ENST00000593089 ZNF620Q6ZNG0 422 aa17.05■□□□□ 0.32
TRIM47-207ENST00000593089 BOLLQ8N9W6 283 aaKnown RBP17.05■□□□□ 0.32
TRIM47-207ENST00000593089 SPTSSAQ969W0 71 aa17.05■□□□□ 0.32
TRIM47-207ENST00000593089 NSMCE2Q96MF7 247 aa17.05■□□□□ 0.32
TRIM47-207ENST00000593089 FAM107BQ9H098 131 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms