RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 BPNT1O95861 308 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 MT-ATP6P00846 226 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 DEFB115Q30KQ5 88 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 PRR22Q8IZ63 422 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 METTL27Q8N6F8 245 aaPredicted RBP16.03■□□□□ 0.16
SPC24-206ENST00000592540 C19orf47Q8N9M1 422 aaKnown RBP16.03■□□□□ 0.16
SPC24-206ENST00000592540 OR52N4Q8NGI2 321 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 TERB2Q8NHR7 220 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 PDE7BQ9NP56 450 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 WIF1Q9Y5W5 379 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 ATXN8OSP0DMR3 200 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 HSD11B1P28845 292 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 NTSR1P30989 418 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 RBM39Q14498 530 aaKnown RBP16.03■□□□□ 0.16
SPC24-206ENST00000592540 SLC29A4Q7RTT9 530 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 DCXRQ7Z4W1 244 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 TMEM230Q96A57 120 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 RAB18Q9NP72 206 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 SMCO4Q9NRQ5 59 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 PCDHGA1Q9Y5H4 931 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 CHD9Q3L8U1 2897 aa16.03■□□□□ 0.16
SPC24-206ENST00000592540 LINC01553A4QN01 128 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 SGCEO43556 437 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 DXOO77932 396 aaKnown RBP16.02■□□□□ 0.16
SPC24-206ENST00000592540 SMIM6P0DI80 62 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 LPAR6P43657 344 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 HSD17B7P56937 341 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 SLC37A1P57057 533 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 ELAVL1Q15717 326 aaKnown RBP16.02■□□□□ 0.16
SPC24-206ENST00000592540 OR2I1PQ8NGU4 316 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 ADAMTS18Q8TE60 1221 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 SLC5A7Q9GZV3 580 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 TCEAL2Q9H3H9 227 aaPredicted RBP16.02■□□□□ 0.16
SPC24-206ENST00000592540 C5orf66Q9H5L9 145 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 ZNF304Q9HCX3 659 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 GPR132Q9UNW8 380 aa16.02■□□□□ 0.16
SPC24-206ENST00000592540 A0A1W2PQF6 199 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 SCGNO76038 276 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 SFT2D2O95562 160 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 NUDT14O95848 222 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 CD5P06127 495 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 ZNF823P16415 610 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 HNRNPA2B1P22626 353 aaKnown RBP16.02■□□□□ 0.15
SPC24-206ENST00000592540 PTAFRP25105 342 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 CRABP1P29762 137 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 GNALP38405 381 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 SLC9A3R2Q15599 337 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 PTCRAQ6ISU1 281 aaPredicted RBP16.02■□□□□ 0.15
SPC24-206ENST00000592540 ARMC6Q6NXE6 501 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 SLC16A13Q7RTY0 426 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 LINC00346Q8IVM7 164 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 SLC22A24Q8N4F4 322 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 NUBPLQ8TB37 319 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 ST7LQ8TDW4 575 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 RELTQ969Z4 430 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 ZNF775Q96BV0 537 aaPredicted RBP16.02■□□□□ 0.15
SPC24-206ENST00000592540 EGLN1Q9GZT9 426 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 PTGES2Q9H7Z7 377 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 PRR13Q9NZ81 148 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 FLVCR1Q9Y5Y0 555 aa16.02■□□□□ 0.15
SPC24-206ENST00000592540 LRP3O75074 770 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 NSA2O95478 260 aaKnown RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 FABP1P07148 127 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 NAT2P11245 290 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 PAX6P26367 422 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 ABCD3P28288 659 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 TNFRSF4P43489 277 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 GSK3AP49840 483 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 HTRA3P83110 453 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 TSC22D1Q15714 1073 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 CLEC18BQ6UXF7 455 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 RBMS3Q6XE24 437 aaKnown RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 C15orf54Q8N8G6 183 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 PTPMT1Q8WUK0 201 aaPredicted RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 MMABQ96EY8 250 aaPredicted RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 CRISPLD2Q9H0B8 497 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 TDRD6O60522 2096 aaKnown RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 C5orf52A6NGY3 159 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 MED6O75586 246 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 IGHMP01871 453 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 CSTBP04080 98 aaKnown RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 S100A8P05109 93 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 CELA2BP08218 269 aaPredicted RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 FCGR3AP08637 254 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 GALNSP34059 522 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 NPY4RP50391 375 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 F2RL1P55085 397 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 SLC26A10Q8NG04 563 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 OR6S1Q8NH40 331 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 GPBAR1Q8TDU6 330 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 GABRG3Q99928 467 aa16.01■□□□□ 0.15
SPC24-206ENST00000592540 PHF3Q92576 2039 aaKnown RBP16.01■□□□□ 0.15
SPC24-206ENST00000592540 C1orf196B1AJZ1 125 aa16■□□□□ 0.15
SPC24-206ENST00000592540 C9JQL5 133 aa16■□□□□ 0.15
SPC24-206ENST00000592540 PLPP3O14495 311 aa16■□□□□ 0.15
SPC24-206ENST00000592540 GP1BBP13224 206 aa16■□□□□ 0.15
SPC24-206ENST00000592540 HOXB2P14652 356 aa16■□□□□ 0.15
SPC24-206ENST00000592540 POLR2GP62487 172 aaKnown RBP eCLIP16■□□□□ 0.15
SPC24-206ENST00000592540 LINC00469Q8N7U9 141 aa16■□□□□ 0.15
SPC24-206ENST00000592540 OR51F2Q8NH61 342 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms