RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 TRAV40A0A0B4J280 105 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 TRBV4-1A0A0J9YWV2 114 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 PHYHO14832 338 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 ARPC3O15145 178 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 IDH3BO43837 385 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 OR10H3O60404 316 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 DIRAS1O95057 198 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 CYB5R3P00387 301 aaPredicted RBP8.5□□□□□ -1.05
VMP1-214ENST00000592106 RNASE1P07998 156 aaKnown RBP8.5□□□□□ -1.05
VMP1-214ENST00000592106 WNT2P09544 360 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 MDH1P40925 334 aaKnown RBP8.5□□□□□ -1.05
VMP1-214ENST00000592106 PITPNBP48739 271 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 ERFP50548 548 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 TPTEP56180 551 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 PAX8Q06710 450 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 MZT1Q08AG7 82 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 MEP1BQ16820 701 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 RFX4Q33E94 735 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 ZNF404Q494X3 552 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 OTPQ5XKR4 325 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 RPL13AP3Q6NVV1 102 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 MRPL21Q7Z2W9 205 aaKnown RBP8.5□□□□□ -1.05
VMP1-214ENST00000592106 MOGAT3Q86VF5 341 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 LINC00346Q8IVM7 164 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 SLC26A10Q8NG04 563 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 SPRYD4Q8WW59 207 aaPredicted RBP8.5□□□□□ -1.05
VMP1-214ENST00000592106 RAB40AQ8WXH6 277 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 SPTSSAQ969W0 71 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 TSSK2Q96PF2 358 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 NMNAT3Q96T66 252 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 C1QTNF5Q9BXJ0 243 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 SRA1Q9HD15 236 aaKnown RBP8.5□□□□□ -1.05
VMP1-214ENST00000592106 TRIM36Q9NQ86 728 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 RPRD1BQ9NQG5 326 aaKnown RBP8.5□□□□□ -1.05
VMP1-214ENST00000592106 CLN8Q9UBY8 286 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 B9D1Q9UPM9 204 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 PCDHGB1Q9Y5G3 927 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 V9GYQ6 96 aa8.5□□□□□ -1.05
VMP1-214ENST00000592106 F5H5K5 113 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 F5H5P2 479 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 CLDN34H7C241 214 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 MLNRO43193 412 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 ENSAO43768 121 aaKnown RBP8.49□□□□□ -1.05
VMP1-214ENST00000592106 LCATP04180 440 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 FABP3P05413 133 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 ACSM4P0C7M7 580 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 HIST1H1CP16403 213 aaKnown RBP8.49□□□□□ -1.05
VMP1-214ENST00000592106 ZNF823P16415 610 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 EGR1P18146 543 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 GGT2P36268 569 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 CD200P41217 278 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 GATA4P43694 442 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 NPY4RP50391 375 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 FXYD6P3P58550 94 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 BPIFB3P59826 476 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 TRAP1Q12931 704 aaKnown RBP8.49□□□□□ -1.05
VMP1-214ENST00000592106 SEC23BQ15437 767 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 OR8G1Q15617 311 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 KLF17Q5JT82 389 aaPredicted RBP8.49□□□□□ -1.05
VMP1-214ENST00000592106 SLC18B1Q6NT16 456 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 CORO6Q6QEF8 472 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 DCDC5Q6ZRR9 648 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 COLCA1Q6ZS62 124 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 C9orf139Q6ZV77 190 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 PGAP1Q75T13 922 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 TSEN54Q7Z6J9 526 aaKnown RBP8.49□□□□□ -1.05
VMP1-214ENST00000592106 LINC00471Q8N535 108 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 OR4K13Q8NH42 304 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 Q8TCH9 128 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 GNPDA2Q8TDQ7 276 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 UPRTQ96BW1 309 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 PYURFQ96I23 114 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 C7orf34Q96L11 122 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 NSMCE2Q96MF7 247 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 NUDT16L1Q9BRJ7 211 aaKnown RBP8.49□□□□□ -1.05
VMP1-214ENST00000592106 TMEM246Q9BRR3 403 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 GORASP2Q9H8Y8 452 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 FN3KRPQ9HA64 309 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 TMEM165Q9HC07 324 aa8.49□□□□□ -1.05
VMP1-214ENST00000592106 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.48□□□□□ -1.05
VMP1-214ENST00000592106 H0YL77 283 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 M0R135 149 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 DCTN6O00399 190 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 ZNF205O95201 554 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 GPANK1O95872 356 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 RRM2P31350 389 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.48□□□□□ -1.05
VMP1-214ENST00000592106 GK2Q14410 553 aaPredicted RBP8.48□□□□□ -1.05
VMP1-214ENST00000592106 C11orf91Q3C1V1 193 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 SAMD4BQ5PRF9 694 aaKnown RBP8.48□□□□□ -1.05
VMP1-214ENST00000592106 GPR157Q5UAW9 335 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 CD276Q5ZPR3 534 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 ZNF620Q6ZNG0 422 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 CFAP77Q6ZQR2 320 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 ZBTB46Q86UZ6 589 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 OR6V1Q8N148 313 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 RNF148Q8N7C7 305 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 SPERTQ8NA61 448 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 SDR9C7Q8NEX9 313 aa8.48□□□□□ -1.05
VMP1-214ENST00000592106 OR2T4Q8NH00 348 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms