RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ESRRGP62508 458 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 PTGES3Q15185 160 aaKnown RBP11.84□□□□□ -0.51
CLIP3-205ENST00000592017 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
CLIP3-205ENST00000592017 KRTAP27-1Q3LI81 207 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 FAM209AQ5JX71 171 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 OR2T2Q6IF00 324 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 DPY19L4Q7Z388 723 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 RAB3IPQ96QF0 476 aaPredicted RBP11.84□□□□□ -0.51
CLIP3-205ENST00000592017 CIB1Q99828 191 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 PKP2Q99959 881 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 BEX2Q9BXY8 128 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 PRRG3Q9BZD7 231 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 TUBG2Q9NRH3 451 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 DDX28Q9NUL7 540 aaKnown RBP11.84□□□□□ -0.51
CLIP3-205ENST00000592017 NKIRAS2Q9NYR9 191 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 TREM2Q9NZC2 230 aa11.84□□□□□ -0.51
CLIP3-205ENST00000592017 CHD3Q12873 2000 aaKnown RBP11.83□□□□□ -0.52
CLIP3-205ENST00000592017 IGHV1-69-2A0A0G2JMI3 117 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 PRODHO43272 600 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 PPIHO43447 177 aaKnown RBP11.83□□□□□ -0.52
CLIP3-205ENST00000592017 TGFAP01135 160 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 SLC2A1P11166 492 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 RAC2P15153 192 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 KITLGP21583 273 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 HSD11B1P28845 292 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 TNFAIP6P98066 277 aaPredicted RBP11.83□□□□□ -0.52
CLIP3-205ENST00000592017 MALLQ13021 153 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 APOFQ13790 326 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 PCK2Q16822 640 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 TEX30Q5JUR7 227 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 KDM4DQ6B0I6 523 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 FAM166AQ6J272 317 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 FBXW12Q6X9E4 464 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 TIGD4Q8IY51 512 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 ZNF283Q8N7M2 679 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 BHLHE23Q8NDY6 225 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 OR2Z1Q8NG97 314 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 ST7LQ8TDW4 575 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 HAVCR1Q96D42 359 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 ELMOD3Q96FG2 381 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 C1QTNF5Q9BXJ0 243 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 EGLN1Q9GZT9 426 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 RIBC2Q9H4K1 309 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.83□□□□□ -0.52
CLIP3-205ENST00000592017 CACNG2Q9Y698 323 aa11.83□□□□□ -0.52
CLIP3-205ENST00000592017 H3BNX3 289 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 PRKYO43930 277 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 RP2O75695 350 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 IFNA2P01563 188 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 MRPL3P09001 348 aaKnown RBP11.82□□□□□ -0.52
CLIP3-205ENST00000592017 TNFSF4P23510 183 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 EPHA2P29317 976 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 CHN2P52757 468 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 MRPS11P82912 194 aaKnown RBP11.82□□□□□ -0.52
CLIP3-205ENST00000592017 SNAI3Q3KNW1 292 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 SLC35D3Q5M8T2 416 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 AVPI1Q5T686 147 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 ZFP1Q6P2D0 407 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 DRAM2Q6UX65 266 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 Q6ZR03 302 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 COLCA1Q6ZS62 124 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 IL17RELQ6ZVW7 336 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 SHFQ7M4L6 423 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 MRPL21Q7Z2W9 205 aaKnown RBP11.82□□□□□ -0.52
CLIP3-205ENST00000592017 ZNF582Q96NG8 517 aaPredicted RBP11.82□□□□□ -0.52
CLIP3-205ENST00000592017 DIRC2Q96SL1 478 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 KCNJ15Q99712 375 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 ABHD6Q9BV23 337 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 ENOPH1Q9UHY7 261 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 ZDHHC8Q9ULC8 765 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
CLIP3-205ENST00000592017 ZAR1LA6NP61 321 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 CLDN25C9JDP6 229 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 WNT9BO14905 357 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 TBX1O43435 398 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 ANXA2P07355 339 aaKnown RBP11.81□□□□□ -0.52
CLIP3-205ENST00000592017 SLC2A5P22732 501 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 ANOS1P23352 680 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 CRYBB2P43320 205 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 SLC15A1P46059 708 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 CX3CR1P49238 355 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 GRB2P62993 217 aaKnown RBP11.81□□□□□ -0.52
CLIP3-205ENST00000592017 MVKQ03426 396 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 HNRNPA0Q13151 305 aaKnown RBP11.81□□□□□ -0.52
CLIP3-205ENST00000592017 GK2Q14410 553 aaPredicted RBP11.81□□□□□ -0.52
CLIP3-205ENST00000592017 HFEQ30201 348 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 SPRNQ5BIV9 151 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 FAM120AOSQ5T036 256 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 LCN1P1Q5VSP4 162 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 SLX4IPQ5VYV7 408 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 PGAP1Q75T13 922 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 BCDIN3DQ7Z5W3 292 aaKnown RBP11.81□□□□□ -0.52
CLIP3-205ENST00000592017 TCEANCQ8N8B7 351 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 OR10AD1Q8NGE0 317 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 OR2AE1Q8NHA4 323 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 THEM6Q8WUY1 208 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 CCL17Q92583 94 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 HPS1Q92902 700 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 C1orf159Q96HA4 380 aa11.81□□□□□ -0.52
CLIP3-205ENST00000592017 AMELYQ99218 206 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms