RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 B3GLCTQ6Y288 498 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 SHFQ7M4L6 423 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 DCXRQ7Z4W1 244 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 DHRSXQ8N5I4 330 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 OR8J1Q8NGP2 316 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 ZNRF4Q8WWF5 429 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 SLC7A6Q92536 515 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 NEUROG1Q92886 237 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 APOL4Q9BPW4 351 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 COPS4Q9BT78 406 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 WNT5BQ9H1J7 359 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 C1orf198Q9H425 327 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 WDR76Q9H967 626 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 FAM118AQ9NWS6 357 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 MRPL22Q9NWU5 206 aaKnown RBP5.54□□□□□ -1.52
VPS4B-205ENST00000591383 AASSQ9UDR5 926 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 SLC23A1Q9UHI7 598 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 KCNG2Q9UJ96 466 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 FBXL3Q9UKT7 428 aa5.54□□□□□ -1.52
VPS4B-205ENST00000591383 HEATR1Q9H583 2144 aaKnown RBP5.54□□□□□ -1.52
VPS4B-205ENST00000591383 SPG11Q96JI7 2443 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 LOC100130705A0A1B0GUX0 176 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 C5orf49A4QMS7 147 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 DPRXA6NFQ7 191 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 DLGAP1O14490 977 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 RER1O15258 196 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ENTPD6O75354 484 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 CTAG2O75638 210 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 GOSR1O95249 250 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 PTHP01270 115 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 IGKV3-15P01624 115 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 IGLV1-44P01699 117 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 GNAO1P09471 354 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 VSIG10L2P0DP72 767 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 PRF1P14222 555 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF14P17017 642 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 STOMP27105 288 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 LOXP28300 417 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 HSD11B1P28845 292 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ATP6V1E1P36543 226 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 VHLP40337 213 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 BLVRAP53004 296 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 LSM6P62312 80 aaKnown RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 PSG4Q00888 419 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 NAAAQ02083 359 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF91Q05481 1191 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 RIPK1Q13546 671 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 KEAP1Q14145 624 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 DAZAP2Q15038 168 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 TAF13Q15543 124 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 SNCBQ16143 134 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 KCNMB1Q16558 191 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 SLC35D3Q5M8T2 416 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF362Q5T0B9 420 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 SPATA46Q5T0L3 261 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 LINC01590Q5TEZ4 76 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 NXNL2Q5VZ03 156 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 TTC23Q5W5X9 447 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 SLC18B1Q6NT16 456 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 RFPL4BQ6ZWI9 263 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 DPY19L4Q7Z388 723 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 CDC20BQ86Y33 519 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF584Q8IVC4 421 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 SLC35F2Q8IXU6 374 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ENTHD1Q8IYW4 607 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 C8orf59Q8N0T1 100 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 PAQR4Q8N4S7 273 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 SETD9Q8NE22 299 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 GJC3Q8NFK1 279 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 OR10H4Q8NGA5 316 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 OR51G2Q8NGK0 314 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 SMAP2Q8WU79 429 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 AKAP1Q92667 903 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 NRGNQ92686 78 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 RFKQ969G6 155 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 C14orf79Q96F83 325 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ZNF582Q96NG8 517 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 DDOQ99489 341 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 TBX5Q99593 518 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ATF6BQ99941 703 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 HDHD2Q9H0R4 259 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 CLN6Q9NWW5 311 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 B3GNT2Q9NY97 397 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 CRNNQ9UBG3 495 aaPredicted RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 LAMP5Q9UJQ1 280 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 ITGB1BP2Q9UKP3 347 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 IKZF2Q9UKS7 526 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 NDRG4Q9ULP0 352 aaKnown RBP5.53□□□□□ -1.52
VPS4B-205ENST00000591383 FZR1Q9UM11 496 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 KLHDC2Q9Y2U9 406 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 TIMM10BQ9Y5J6 103 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 CCDC168Q8NDH2 2452 aa5.53□□□□□ -1.52
VPS4B-205ENST00000591383 RAI1Q7Z5J4 1906 aaPredicted RBP5.52□□□□□ -1.53
VPS4B-205ENST00000591383 MAST4O15021 2626 aa5.52□□□□□ -1.53
VPS4B-205ENST00000591383 A0A1W2PPR1 153 aa5.52□□□□□ -1.53
VPS4B-205ENST00000591383 OR6C6A6NF89 314 aa5.52□□□□□ -1.53
VPS4B-205ENST00000591383 SNTNA6NMZ2 147 aa5.52□□□□□ -1.53
VPS4B-205ENST00000591383 SHISA9B4DS77 424 aa5.52□□□□□ -1.53
VPS4B-205ENST00000591383 ZNF878C9JN71 531 aa5.52□□□□□ -1.53
VPS4B-205ENST00000591383 J3KRW8 73 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms