RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NIPAL2Q9H841 368 aa17.25■□□□□ 0.35
DNMT1-216ENST00000588952 ATP23Q9Y6H3 246 aa17.25■□□□□ 0.35
DNMT1-216ENST00000588952 R4GMQ9 66 aa17.25■□□□□ 0.35
DNMT1-216ENST00000588952 TMEM129A0AVI4 362 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 CTAG2O75638 210 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 LALBAP00709 142 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 LCATP04180 440 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 ANXA2P07355 339 aaKnown RBP17.24■□□□□ 0.35
DNMT1-216ENST00000588952 SPATA46Q5T0L3 261 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 ZNF787Q6DD87 383 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 XAF1Q6GPH4 301 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 VHLLQ6RSH7 139 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 FAM220AQ7Z4H9 259 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 KCTD20Q7Z5Y7 419 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 NANOGP1Q8N7R0 232 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 NUP37Q8NFH4 326 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 OR52N1Q8NH53 320 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 GATAD2BQ8WXI9 593 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 G6PC2Q9NQR9 355 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 TBCCD1Q9NVR7 557 aa17.24■□□□□ 0.35
DNMT1-216ENST00000588952 CHCHD3Q9NX63 227 aaKnown RBP17.24■□□□□ 0.35
DNMT1-216ENST00000588952 EIF3KQ9UBQ5 218 aaKnown RBP17.24■□□□□ 0.35
DNMT1-216ENST00000588952 LSM2Q9Y333 95 aaKnown RBP17.24■□□□□ 0.35
DNMT1-216ENST00000588952 TMEM269A0A1B0GVZ9 245 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 THBS4P35443 961 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 NANOS3P60323 173 aaKnown RBP17.23■□□□□ 0.35
DNMT1-216ENST00000588952 PPP1CBP62140 327 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 ZNF829Q3KNS6 432 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-216ENST00000588952 ZNF672Q499Z4 452 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-216ENST00000588952 TMEM255AQ5JRV8 349 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 GLYATL3Q5SZD4 288 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 PRSS35Q8N3Z0 413 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 OR8B12Q8NGG6 310 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 OR1J1Q8NGS3 322 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 TMEM171Q8WVE6 324 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 APOBEC3DQ96AK3 386 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-216ENST00000588952 MRPL48Q96GC5 212 aaKnown RBP17.23■□□□□ 0.35
DNMT1-216ENST00000588952 OR5M11Q96RB7 305 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 PTTG3PQ9NZH4 202 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 POU2F3Q9UKI9 436 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 SLC22A13Q9Y226 551 aa17.23■□□□□ 0.35
DNMT1-216ENST00000588952 PTPN13Q12923 2485 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 LOC110117498-PIK3R3F6TDL0 507 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 MYL12BO14950 172 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 GOSR1O95249 250 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 MT-ND5P03915 603 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 KIR3DL2P43630 455 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 RGS6P49758 472 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 MMP16P51512 607 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 GTF2A1P52655 376 aaPredicted RBP17.22■□□□□ 0.35
DNMT1-216ENST00000588952 PRSS12P56730 875 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 TMPRSS11AQ6ZMR5 421 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 CATSPERDQ86XM0 798 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 KLBQ86Z14 1044 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 OR2AE1Q8NHA4 323 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 SLC25A40Q8TBP6 338 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 AKAP1Q92667 903 aaKnown RBP eCLIP17.22■□□□□ 0.35
DNMT1-216ENST00000588952 PGAM5Q96HS1 289 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 PBOV1Q9GZY1 135 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 ZNF696Q9H7X3 374 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 CA10Q9NS85 328 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 FZR1Q9UM11 496 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 GTF2A1LQ9UNN4 478 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 ERGIC3Q9Y282 383 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 SIRT4Q9Y6E7 314 aaPredicted RBP17.22■□□□□ 0.35
DNMT1-216ENST00000588952 DCHS2Q6V1P9 2916 aa17.22■□□□□ 0.35
DNMT1-216ENST00000588952 ABCA4P78363 2273 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 TBX1O43435 398 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 TNFAIP8O95379 198 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 APOC1P02654 83 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 LCKP06239 509 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 TACSTD2P09758 323 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 GLRXP35754 106 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 MPV17P39210 176 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 RAD52P43351 418 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 WNT4P56705 351 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 HLXQ14774 488 aaPredicted RBP17.21■□□□□ 0.35
DNMT1-216ENST00000588952 WDR38Q5JTN6 314 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 ZNF773Q6PK81 442 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 ARL9Q6T311 187 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 SPARTQ8N0X7 666 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 OR2G2Q8NGZ5 317 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 MARVELD3Q96A59 401 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 MARS2Q96GW9 593 aaKnown RBP17.21■□□□□ 0.35
DNMT1-216ENST00000588952 SOX7Q9BT81 388 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 MND1Q9BWT6 205 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 BCL2L14Q9BZR8 327 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 OR2J1Q9GZK6 312 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 NUFIP1Q9UHK0 495 aaKnown RBP17.21■□□□□ 0.35
DNMT1-216ENST00000588952 ST6GALNAC2Q9UJ37 374 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 OR52A1Q9UKL2 312 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 SPEF1Q9Y4P9 236 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 SNX5Q9Y5X3 404 aa17.21■□□□□ 0.35
DNMT1-216ENST00000588952 TTRP02766 147 aa17.2■□□□□ 0.34
DNMT1-216ENST00000588952 PCMT1P22061 227 aa17.2■□□□□ 0.34
DNMT1-216ENST00000588952 GBX2P52951 348 aaPredicted RBP17.2■□□□□ 0.34
DNMT1-216ENST00000588952 ZNF92Q03936 586 aa17.2■□□□□ 0.34
DNMT1-216ENST00000588952 TLE4Q04727 773 aa17.2■□□□□ 0.34
DNMT1-216ENST00000588952 TBCEQ15813 527 aaPredicted RBP17.2■□□□□ 0.34
DNMT1-216ENST00000588952 BCL2L15Q5TBC7 163 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms