RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 RBPJQ06330 500 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 FAM57BQ71RH2 274 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 DPPA2Q7Z7J5 298 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 TPRA1Q86W33 373 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 BOD1Q96IK1 185 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 SFXN3Q9BWM7 321 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 PLEKHB1Q9UF11 243 aaPredicted RBP22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 A0A1B0GTI1 187 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 C5orf63A6NC05 138 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 LYZL6O75951 148 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 NCR1O76036 304 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 RAF1P04049 648 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 ANXA2P07355 339 aaKnown RBP22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 GABRA6Q16445 453 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 DRAM2Q6UX65 266 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 TSEN15Q8WW01 171 aaKnown RBP22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 THRSPQ92748 146 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 MMP27Q9H306 513 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 CXorf56Q9H5V9 222 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 USP24Q9UPU5 2620 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 UBL3O95164 117 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 CD79AP11912 226 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 SRMP19623 302 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 ARR3P36575 388 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 SLC6A9P48067 706 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 TPTEP56180 551 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 RAB1AP62820 205 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 OR51E1Q8TCB6 317 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 N6AMT1Q9Y5N5 214 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 SHANK1Q9Y566 2161 aa22.68■■□□□ 1.22
SCAMP4-210ENST00000588555 RAD51DO75771 328 aa22.67■■□□□ 1.22
SCAMP4-210ENST00000588555 IGLV3-1P01715 115 aa22.67■■□□□ 1.22
SCAMP4-210ENST00000588555 KCNS3Q9BQ31 491 aa22.67■■□□□ 1.22
SCAMP4-210ENST00000588555 DHDHQ9UQ10 334 aa22.67■■□□□ 1.22
SCAMP4-210ENST00000588555 A0A075B6Q4 140 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 A0A0G2JK05 382 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 COX5BP10606 129 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 PMPCAQ10713 525 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 CEP78Q5JTW2 689 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 ASPHD2Q6ICH7 369 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 TMEM53Q6P2H8 277 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 LINC00299Q6ZSB3 139 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 ZNF584Q8IVC4 421 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 C1orf162Q8NEQ5 155 aaPredicted RBP22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 KALRNO60229 2985 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 CCL1P22362 96 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 OR6Q1Q8NGQ2 317 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 NANOS1Q8WY41 292 aaKnown RBP22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 PGAM5Q96HS1 289 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 ZNF75AQ96N20 296 aa22.66■■□□□ 1.22
SCAMP4-210ENST00000588555 LOC100509620A0A075B734 347 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 A0A0U1RQV5 110 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 IQCMA0A1B0GVH7 501 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 CIB4A0PJX0 185 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 ANKRD61A6NGH8 418 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 PAX7P23759 505 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 APEX1P27695 318 aaKnown RBP22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 BMXP51813 675 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 OR10A3P58181 314 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 P2RY6Q15077 328 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 SNAI3Q3KNW1 292 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 BEND4Q6ZU67 534 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 CCDC36Q8IYA8 594 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 SOX7Q9BT81 388 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 GPR84Q9NQS5 396 aa22.65■■□□□ 1.22
SCAMP4-210ENST00000588555 TRAV8-7A0A075B6U6 113 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 SYT7O43581 403 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 LMX1BO60663 402 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 RAB3BP20337 219 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 TSC22D1Q15714 1073 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 GSG1Q2KHT4 349 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 CXorf67Q86X51 503 aaPredicted RBP22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 ST6GALNAC3Q8NDV1 305 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 OR13C3Q8NGS6 347 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 C6orf62Q9GZU0 229 aaPredicted RBP22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 SH3BGRL2Q9UJC5 107 aa22.64■■□□□ 1.22
SCAMP4-210ENST00000588555 A0A0G2JNJ9 132 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 INHBBP09529 407 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 ZNF474Q6S9Z5 364 aaPredicted RBP22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 STAC2Q6ZMT1 411 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 LUZP2Q86TE4 346 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 MDP1Q86V88 176 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 OR52H1Q8NGJ2 320 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 LYZL4Q96KX0 146 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 GFI1Q99684 422 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 ZCCHC4Q9H5U6 513 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 ZNF275Q9NSD4 429 aaPredicted RBP22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 Q9UFV3 132 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 POLEQ07864 2286 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 A0A1B0GVI7 797 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 CD2P06729 351 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 HOXB1P14653 301 aaPredicted RBP22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 LRRTM1Q86UE6 522 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 PLPP7Q8NBV4 271 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 SLC30A2Q9BRI3 323 aa22.63■■□□□ 1.21
SCAMP4-210ENST00000588555 ADRA2CP18825 462 aa22.62■■□□□ 1.21
SCAMP4-210ENST00000588555 STOMP27105 288 aa22.62■■□□□ 1.21
SCAMP4-210ENST00000588555 OPRM1P35372 400 aa22.62■■□□□ 1.21
SCAMP4-210ENST00000588555 SFXN4Q6P4A7 337 aa22.62■■□□□ 1.21
SCAMP4-210ENST00000588555 NCCRP1Q6ZVX7 275 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms