RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 SHISA2Q6UWI4 295 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 BTNL3Q6UXE8 466 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 COLCA1Q6ZS62 124 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 OR8B3Q8NGG8 313 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 RAB40AQ8WXH6 277 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 SLC25A28Q96A46 364 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 SLCO4A1Q96BD0 722 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 UPRTQ96BW1 309 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 OR8B2Q96RD0 313 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 IFT27Q9BW83 186 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 TMEM100Q9NV29 134 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 MRPL22Q9NWU5 206 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 ADA2Q9NZK5 511 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 MIOXQ9UGB7 285 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 TMCC3Q9ULS5 477 aa12.67□□□□□ -0.38
PRKCSH-204ENST00000587290 J3QW42 95 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 HOXA3O43365 443 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 RENP00797 406 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 HLA-DQA2P01906 255 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 LCATP04180 440 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 SLC6A6P31641 620 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 PYCR1P32322 319 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 GGT2P36268 569 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 FGF12P61328 243 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 SRSF4Q08170 494 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 TRAP1Q12931 704 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 KRT72Q14CN4 511 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 DEFB112Q30KQ8 113 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 RFX4Q33E94 735 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 SNAI3Q3KNW1 292 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 CLEC12AQ5QGZ9 265 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 SPATC1Q76KD6 591 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 FITM2Q8N6M3 262 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 OR10S1Q8NGN2 331 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 OR2AE1Q8NHA4 323 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 ZNRF4Q8WWF5 429 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 MAP6Q96JE9 813 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 ATF6BQ99941 703 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 NUDT16L1Q9BRJ7 211 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 HCAR1Q9BXC0 346 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 CTSZQ9UBR2 303 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 SAMD4AQ9UPU9 718 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 WNK1Q9H4A3 2382 aa12.66□□□□□ -0.38
PRKCSH-204ENST00000587290 A0A1B0GWJ7 208 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 LRRC30A6NM36 301 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 IFNL4K9M1U5 179 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 OR10H3O60404 316 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 GADD45GO95257 159 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 SEMG1P04279 462 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 SFTPBP07988 381 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 CA6P23280 308 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 WDR25Q64LD2 544 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 SFRP4Q6FHJ7 346 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 PGM2L1Q6PCE3 622 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 ZNF841Q6ZN19 808 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 CYB561A3Q8NBI2 242 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 PLEKHA8Q96JA3 519 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 ELAC2Q9BQ52 826 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 MYLK2Q9H1R3 596 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 MMADHCQ9H3L0 296 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 EGLN3Q9H6Z9 239 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 MARCH7Q9H992 704 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 SPAG4Q9NPE6 437 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 KRCC1Q9NPI7 259 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 CLN8Q9UBY8 286 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
PRKCSH-204ENST00000587290 KIR2DS1A0A191URI9 304 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 TVP23AA6NH52 213 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 IRF2P14316 349 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 NOS3P29474 1203 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 MTNR1AP48039 350 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 RAD23AP54725 363 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 ZNF181Q2M3W8 571 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 C9orf139Q6ZV77 190 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 PGAP1Q75T13 922 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 NLRC3Q7RTR2 1065 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 MRPL21Q7Z2W9 205 aaKnown RBP12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 ZBTB46Q86UZ6 589 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 LNX2Q8N448 690 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 OR51L1Q8NGJ5 315 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 OR2AJ1Q8NGZ0 328 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 PYURFQ96I23 114 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 TECTBQ96PL2 329 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 PCGF1Q9BSM1 259 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 FAM107BQ9H098 131 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 NSRP1Q9H0G5 558 aaKnown RBP12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 ZNF696Q9H7X3 374 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 ZMAT3Q9HA38 289 aaKnown RBP12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 SMURF1Q9HCE7 757 aa12.64□□□□□ -0.39
PRKCSH-204ENST00000587290 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 CLDN34H7C241 214 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 M0R135 149 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 ARPC3O15145 178 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 RRM2P31350 389 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 GATA4P43694 442 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 GSSP48637 474 aa12.63□□□□□ -0.39
PRKCSH-204ENST00000587290 ZNF92Q03936 586 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms