RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 DEGS2Q6QHC5 323 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ARL9Q6T311 187 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 IL17RELQ6ZVW7 336 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 RHOUQ7L0Q8 258 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 NUFIP2Q7Z417 695 aaKnown RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 GLB1L2Q8IW92 636 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ZNF611Q8N823 705 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 OR10H5Q8NGA6 315 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 OR10D3Q8NH80 312 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 RPS4Y2Q8TD47 263 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 CPNE4Q96A23 557 aaPredicted RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 MRI1Q9BV20 369 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 TMED9Q9BVK6 235 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 PRRG4Q9BZD6 226 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 SLCO5A1Q9H2Y9 848 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 AKIP1Q9NQ31 210 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 PLSCR4Q9NRQ2 329 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 KLHL13Q9P2N7 655 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 RCE1Q9Y256 329 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ZNF175Q9Y473 711 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 IGHV4-30-2A0A087WSY4 118 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 TRAV1-2A0A0B4J238 106 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 A0A0J9YW62 118 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 LOC110117498-PIK3R3F6TDL0 507 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 OVOL3O00110 214 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 PDCD5O14737 125 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 CD5LO43866 347 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 CDRT1O95170 752 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 LALBAP00709 142 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 CD8AP01732 235 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 DANCRP0C864 163 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ZNF12P17014 697 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ALOX5APP20292 161 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 EDNRAP25101 427 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 CALRP27797 417 aaKnown RBP6.83□□□□□ -1.32
VMP1-204ENST00000587259 AGTR1P30556 359 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 DCTDP32321 178 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 SDC2P34741 201 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 OPRL1P41146 370 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 BMXP51813 675 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 RIDAP52758 137 aaKnown RBP6.83□□□□□ -1.32
VMP1-204ENST00000587259 BIDP55957 195 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 OR12D2P58182 307 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 PPP3R1P63098 170 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 H3F3AP84243 136 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ROM1Q03395 351 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 MELKQ14680 651 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 KRTAP24-1Q3LI83 254 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 FDX2Q6P4F2 183 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 B3GLCTQ6Y288 498 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 GPAT4Q86UL3 456 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ZNF679Q8IYX0 411 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 YIPF7Q8N8F6 280 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 MINDY2Q8NBR6 621 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 OR51L1Q8NGJ5 315 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 OR6K3Q8NGY3 331 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 OR52N5Q8NH56 324 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ABHD3Q8WU67 409 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 SMAP2Q8WU79 429 aaPredicted RBP6.83□□□□□ -1.32
VMP1-204ENST00000587259 TMEM203Q969S6 136 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 PELI1Q96FA3 418 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ADGRG7Q96K78 797 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 PGLYRP3Q96LB9 341 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 WDFY2Q96P53 400 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 OR8B4Q96RC9 309 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 CDADC1Q9BWV3 514 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 SRXN1Q9BYN0 137 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 SLITRK2Q9H156 845 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 RERGLQ9H628 205 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 NIPAL2Q9H841 368 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 MOB1AQ9H8S9 216 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ISG20L2Q9H9L3 353 aaKnown RBP6.83□□□□□ -1.32
VMP1-204ENST00000587259 SMURF1Q9HCE7 757 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 B3GAT1Q9P2W7 334 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 RABL2AQ9UBK7 228 aaPredicted RBP6.83□□□□□ -1.32
VMP1-204ENST00000587259 IKZF2Q9UKS7 526 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 RABL2BQ9UNT1 228 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 ZNF281Q9Y2X9 895 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 EMC9Q9Y3B6 208 aa6.83□□□□□ -1.32
VMP1-204ENST00000587259 CADP27708 2225 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 IGHV3-15A0A0B4J1V0 119 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 A0A1W2PNR3 127 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 ISPDA4D126 451 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 DPRXA6NFQ7 191 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 OR6C65A6NJZ3 312 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 H7C1C5 153 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 TRAF3IP2O43734 574 aaPredicted RBP6.82□□□□□ -1.32
VMP1-204ENST00000587259 EFNA2O43921 213 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 SSX4O60224 188 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 SS18L1O75177 396 aaPredicted RBP6.82□□□□□ -1.32
VMP1-204ENST00000587259 SC5DO75845 299 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 SPARCP09486 303 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 PGA4P0DJD7 388 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 PGA3P0DJD8 388 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 CTLA4P16410 223 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 ENPP1P22413 925 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 PTBP1P26599 531 aaKnown RBP eCLIP6.82□□□□□ -1.32
VMP1-204ENST00000587259 RPS19P39019 145 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms