RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 Q8TCH9 128 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 NMNAT3Q96T66 252 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 FUZQ9BT04 418 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 SLITRK2Q9H156 845 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 PHYHO14832 338 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 HOXA3O43365 443 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-216ENST00000586813 CCDC22O60826 627 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 MDH1P40925 334 aaKnown RBP16.13■□□□□ 0.17
TRAF4-216ENST00000586813 WDR25Q64LD2 544 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-216ENST00000586813 C16orf87Q6PH81 154 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 LYPD2Q6UXB3 125 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 BRD3OSQ6XYD6 125 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 TMIGD2Q96BF3 282 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 PITX2Q99697 317 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 ATF6BQ99941 703 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 CDADC1Q9BWV3 514 aa16.13■□□□□ 0.17
TRAF4-216ENST00000586813 SRA1Q9HD15 236 aaKnown RBP16.13■□□□□ 0.17
TRAF4-216ENST00000586813 SAMD4AQ9UPU9 718 aaKnown RBP16.13■□□□□ 0.17
TRAF4-216ENST00000586813 F5H5K5 113 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 ARPC3O15145 178 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 FAM20BO75063 409 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 RENP00797 406 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 HIST1H1CP16403 213 aaKnown RBP16.12■□□□□ 0.17
TRAF4-216ENST00000586813 SLC6A6P31641 620 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 CD200P41217 278 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 RAD23AP54725 363 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 FGF12P61328 243 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 ECH1Q13011 328 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 MALLQ13021 153 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 KRT72Q14CN4 511 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 DEFB112Q30KQ8 113 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 CLEC12AQ5QGZ9 265 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 PRAMEF6Q5VXH4 476 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 ZNF841Q6ZN19 808 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 C19orf18Q8NEA5 215 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 OR11L1Q8NGX0 322 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 OR4K13Q8NH42 304 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 ERGIC1Q969X5 290 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 OR52D1Q9H346 318 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 PRDM13Q9H4Q3 707 aa16.12■□□□□ 0.17
TRAF4-216ENST00000586813 PNRC2Q9NPJ4 139 aaKnown RBP16.12■□□□□ 0.17
TRAF4-216ENST00000586813 RPRD1BQ9NQG5 326 aaKnown RBP16.12■□□□□ 0.17
TRAF4-216ENST00000586813 DCAF13Q9NV06 445 aaKnown RBP16.12■□□□□ 0.17
TRAF4-216ENST00000586813 CMYA5Q8N3K9 4069 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 C22orf46C9J442 243 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 LCATP04180 440 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 OMGP23515 440 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 GGT2P36268 569 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 PSMB10P40306 273 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 PSME3P61289 254 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 TRAP1Q12931 704 aaKnown RBP16.11■□□□□ 0.17
TRAF4-216ENST00000586813 RFX4Q33E94 735 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 SLC36A3Q495N2 470 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 GPR157Q5UAW9 335 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 GLYATQ6IB77 296 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 NAA40Q86UY6 237 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 ZBTB46Q86UZ6 589 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 OR2AJ1Q8NGZ0 328 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 ZDHHC16Q969W1 377 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 FN3KQ9H479 309 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 UFSP2Q9NUQ7 469 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 CYB5R1Q9UHQ9 305 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 TMCC3Q9ULS5 477 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 MMP24Q9Y5R2 645 aa16.11■□□□□ 0.17
TRAF4-216ENST00000586813 SRRM5B3KS81 715 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 ENSAO43768 121 aaKnown RBP16.1■□□□□ 0.17
TRAF4-216ENST00000586813 HOXA4Q00056 320 aaPredicted RBP16.1■□□□□ 0.17
TRAF4-216ENST00000586813 MPPED2Q15777 294 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 PGAP1Q75T13 922 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 MRPL21Q7Z2W9 205 aaKnown RBP16.1■□□□□ 0.17
TRAF4-216ENST00000586813 SPRYD4Q8WW59 207 aaPredicted RBP16.1■□□□□ 0.17
TRAF4-216ENST00000586813 SLCO4A1Q96BD0 722 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 TECTBQ96PL2 329 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 IFT27Q9BW83 186 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 SPAG4Q9NPE6 437 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 V9GYQ6 96 aa16.1■□□□□ 0.17
TRAF4-216ENST00000586813 OR6C68A6NDL8 312 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 GADD45GO95257 159 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 HLA-DQA2P01906 255 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 NOS3P29474 1203 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 NPY4RP50391 375 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 SMIM11AP58511 58 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 BPIFB3P59826 476 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 SPIBQ01892 262 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 OR8G1Q15617 311 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 RUSC1-AS1Q66K80 236 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 SDR9C7Q8NEX9 313 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 PCGF1Q9BSM1 259 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 MMADHCQ9H3L0 296 aaPredicted RBP16.09■□□□□ 0.17
TRAF4-216ENST00000586813 FN3KRPQ9HA64 309 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 CTSZQ9UBR2 303 aa16.09■□□□□ 0.17
TRAF4-216ENST00000586813 FAM181BA6NEQ2 426 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 M0R135 149 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 SEMG1P04279 462 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 SFTPBP07988 381 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 CA6P23280 308 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 CFHR2P36980 270 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 TPTEP56180 551 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 KCNJ8Q15842 424 aa16.08■□□□□ 0.16
TRAF4-216ENST00000586813 Q6YL49 198 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms