RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 C10orf105Q8TEF2 133 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 NSMAFQ92636 917 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 POM121L2Q96KW2 1035 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 SAMD8Q96LT4 415 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 WACQ9BTA9 647 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 MRPL37Q9BZE1 423 aaKnown RBP7.42□□□□□ -1.22
ATG4D-202ENST00000585437 OR2H1Q9GZK4 316 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 SYT4Q9H2B2 425 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 MMP27Q9H306 513 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 MYOZ1Q9NP98 299 aaPredicted RBP7.42□□□□□ -1.22
ATG4D-202ENST00000585437 POLE4Q9NR33 117 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 CMC2Q9NRP2 79 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 INPP5EQ9NRR6 644 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 NDUFB11Q9NX14 153 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 IL20RAQ9UHF4 553 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 LSM2Q9Y333 95 aaKnown RBP7.42□□□□□ -1.22
ATG4D-202ENST00000585437 CMAHPQ9Y471 501 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 SPEF1Q9Y4P9 236 aa7.42□□□□□ -1.22
ATG4D-202ENST00000585437 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.42□□□□□ -1.221e-7■■■□□ 16.1
ATG4D-202ENST00000585437 LOC100509620A0A075B734 347 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 IGLV1-36A0A0B4J1U3 117 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 IQCMA0A1B0GVH7 501 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 A0A1W2PPL8 197 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 RNF223E7ERA6 249 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 DCTN6O00399 190 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 BHLHE40O14503 412 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 SYNGR3O43761 229 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 LY6HO94772 140 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 PPP1R3DO95685 299 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 LY6G6DO95868 133 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 GAAP10253 952 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 CCL2P13500 99 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ZNF250P15622 560 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 SLC25A16P16260 332 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 HOXB4P17483 251 aaPredicted RBP7.41□□□□□ -1.22
ATG4D-202ENST00000585437 APEX1P27695 318 aaKnown RBP7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ATP6V1E1P36543 226 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 WNT5AP41221 380 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 CDKN2AP42771 156 aaKnown RBP7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ENTPD1P49961 510 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 LSM3P62310 102 aaKnown RBP7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ACTC1P68032 377 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ACTA1P68133 377 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 PSG4Q00888 419 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 GALK2Q01415 458 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 KCNMB1Q16558 191 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 TBC1D28Q2M2D7 210 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ZNF404Q494X3 552 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 LCN1P1Q5VSP4 162 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 C16orf87Q6PH81 154 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 CLEC2AQ6UVW9 174 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 CLEC9AQ6UXN8 241 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 KLHL36Q8N4N3 616 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 OR1J2Q8NGS2 313 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 OR52N1Q8NH53 320 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 UFD1Q92890 307 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 OPALINQ96PE5 141 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 OR5M11Q96RB7 305 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 COQ7Q99807 217 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 IFT27Q9BW83 186 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ZNF416Q9BWM5 594 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 REG4Q9BYZ8 158 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 NUAK2Q9H093 628 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 WNT5BQ9H1J7 359 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 RNF121Q9H920 327 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 MYEF2Q9P2K5 600 aaKnown RBP7.41□□□□□ -1.22
ATG4D-202ENST00000585437 KLHL21Q9UJP4 597 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 STUB1Q9UNE7 303 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 IER3IP1Q9Y5U9 82 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 FKBP7Q9Y680 259 aa7.41□□□□□ -1.22
ATG4D-202ENST00000585437 ABCA1O95477 2261 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 LOC100506127A0A0U1RQW1 187 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 C12orf71A8MTZ7 269 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 VSTM5A8MXK1 200 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 PRR23D1E9PI22 279 aaPredicted RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 M0R233 179 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 NDUFS8O00217 210 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 SMAD7O15105 426 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 IDH3BO43837 385 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 IGHA1P01876 353 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 PRR23D2P0DMB1 279 aaPredicted RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 COX5BP10606 129 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 HIST1H1CP16403 213 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 CPEP16870 476 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 ZNF12P17014 697 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 STOMP27105 288 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 GIFP27352 417 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 NOS3P29474 1203 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 S100A5P33763 92 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 APLNRP35414 380 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 UCP2P55851 309 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 PCBD1P61457 104 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 ERVS71-1P61550 626 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 LSM6P62312 80 aaKnown RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 HIST1H3AP68431 136 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 BDH1Q02338 343 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 HSF2Q03933 536 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 PLP2Q04941 152 aa7.4□□□□□ -1.22
ATG4D-202ENST00000585437 LOXL1Q08397 574 aaPredicted RBP7.4□□□□□ -1.22
ATG4D-202ENST00000585437 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms