RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FAHD2AQ96GK7 314 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 LOC100509620A0A075B734 347 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 IGHV1OR21-1A0A087WYE8 117 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 METTL12A8MUP2 240 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 APOC3P02656 99 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 VSIG8P0DPA2 414 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 GNALP38405 381 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CD96P40200 585 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 APOBEC1P41238 236 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 HNRNPKP61978 463 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 IL13RA1P78552 427 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TLE3Q04726 772 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 C16orf47Q6ZP98 133 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CFAP77Q6ZQR2 320 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CHST4Q8NCG5 386 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR1M1Q8NGA1 313 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 NUDCD2Q8WVJ2 157 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SLAMF6Q96DU3 332 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZNF75AQ96N20 296 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PHB2Q99623 299 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PTGES2Q9H7Z7 377 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CHST11Q9NPF2 352 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PLEKHA6Q9Y2H5 1048 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FER1L5A0AVI2 2057 aa12.64□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 C2orf72A6NCS6 295 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SYT7O43581 403 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DCNP07585 359 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CNR1P21554 472 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 HRH1P35367 487 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DLSTP36957 453 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EIF1AXP47813 144 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 C17orf67Q0P5P2 114 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZNF529Q6P280 563 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ATRAIDQ6UW56 229 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PLPP5Q8NEB5 264 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 C11orf40Q8WZ69 217 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 NUDT16L1Q9BRJ7 211 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZC4H2Q9NQZ6 224 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CTSFQ9UBX1 484 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SPEGQ15772 3267 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 MYO15AQ9UKN7 3530 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR2AT4A6NND4 320 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TOR1AO14656 332 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SCGNO76038 276 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 WDPCPO95876 746 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 GSK3AP49840 483 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FBXW4P57775 412 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PLXDC1Q8IUK5 500 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DTWD2Q8NBA8 298 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 RBM14Q96PK6 669 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PBOV1Q9GZY1 135 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TAS2R3Q9NYW6 316 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FBLN5Q9UBX5 448 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SLC5A6Q9Y289 635 aa12.63□□□□□ -0.39
CDK5RAP3-237ENST00000585163 IGHV3-20A0A0C4DH32 117 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 NUPL2O15504 423 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZNF208O43345 1280 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ZNF354AO60765 605 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 GNB3P16520 340 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TBPP20226 339 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 AVPR2P30518 371 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PRKXP51817 358 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 LBX1P52954 281 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CLDN6P56747 220 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 GPR85P60893 370 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 PAN3Q58A45 887 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 BEX5Q5H9J7 111 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 KLHL24Q6TFL4 600 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR2W3Q7Z3T1 314 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR10S1Q8NGN2 331 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DUSP15Q9H1R2 295 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FANCFQ9NPI8 374 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 IFT46Q9NQC8 304 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CEP290O15078 2479 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 EFSO43281 561 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ERCC1P07992 297 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 RAB3AP20336 220 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CASRP41180 1078 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SUMO3P55854 103 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ATXN7L3Q14CW9 347 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 ELP2Q6IA86 826 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SHISA6Q6ZSJ9 500 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 OR10H5Q8NGA6 315 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 THAP6Q8TBB0 222 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 DDIT4LQ96D03 193 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 C5orf34Q96MH7 638 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 FOXQ1Q9C009 403 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 CHRDQ9H2X0 955 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 GAREM1Q9H706 876 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 SEMA5BQ9P283 1151 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 KLHL13Q9P2N7 655 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 VDAC3Q9Y277 283 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 KCNK7Q9Y2U2 307 aa12.62□□□□□ -0.39
CDK5RAP3-237ENST00000585163 LIPT2A6NK58 231 aa12.61□□□□□ -0.39
CDK5RAP3-237ENST00000585163 TMEM14DPA8MWL7 114 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms