RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CCSO14618 274 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 TSPAN4O14817 238 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 NUPL2O15504 423 aaKnown RBP9.1□□□□□ -0.95
RFFL-212ENST00000584655 SERPINA3P01011 423 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 ART1P52961 327 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 CDNFQ49AH0 187 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 CDONQ4KMG0 1287 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 HIKESHIQ53FT3 197 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 KCTD9Q7L273 389 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 LRRC75AQ8NAA5 344 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 PBOV1Q9GZY1 135 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 TMEM14AQ9Y6G1 99 aa9.1□□□□□ -0.95
RFFL-212ENST00000584655 OR6C76A6NM76 312 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 I3L521 148 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 GFRA3O60609 400 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 OPRM1P35372 400 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 MEOX1P50221 254 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 MLF1P58340 268 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 TSPAN5P62079 268 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 RAB11BQ15907 218 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 TSPO2Q5TGU0 170 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 ZNF227Q86WZ6 799 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 MINDY2Q8NBR6 621 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 OR4D6Q8NGJ1 314 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 PSMF1Q92530 271 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 SEC22AQ96IW7 307 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 TMPRSS13Q9BYE2 586 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 GLTPQ9NZD2 209 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 NXT1Q9UKK6 140 aaKnown RBP9.09□□□□□ -0.95
RFFL-212ENST00000584655 IGLV1-36A0A0B4J1U3 117 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 PTTG1O95997 202 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 ACSM4P0C7M7 580 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 FCGR2AP12318 317 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 PGAM2P15259 253 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 ZNF32P17041 273 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 NDUFA5Q16718 116 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 XKRXQ6PP77 449 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 BTN2A1Q7KYR7 527 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 LRRTM1Q86UE6 522 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 MYPOPQ86VE0 399 aaPredicted RBP9.09□□□□□ -0.95
RFFL-212ENST00000584655 CDC20BQ86Y33 519 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 ST8SIA1Q92185 356 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 MRGPRX4Q96LA9 322 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 FBXO4Q9UKT5 387 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 PLEKHA6Q9Y2H5 1048 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 SPEF1Q9Y4P9 236 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 PCDHGB2Q9Y5G2 931 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 C5orf49A4QMS7 147 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 DXOO77932 396 aaKnown RBP9.09□□□□□ -0.95
RFFL-212ENST00000584655 OR3A4PP47883 348 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 FCN2Q15485 313 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 OR9K2Q8NGE7 335 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 TTC9Q92623 222 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 RBMXL1Q96E39 390 aaKnown RBP9.09□□□□□ -0.95
RFFL-212ENST00000584655 GFI1Q99684 422 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 PIGQQ9BRB3 760 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 TGIF2Q9GZN2 237 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 MOV10Q9HCE1 1003 aaKnown RBP9.09□□□□□ -0.95
RFFL-212ENST00000584655 ZNF224Q9NZL3 707 aa9.09□□□□□ -0.95
RFFL-212ENST00000584655 NOTCH3Q9UM47 2321 aa9.09□□□□□ -0.96
RFFL-212ENST00000584655 FTCDNL1E5RQL4 147 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TRAF3IP2O43734 574 aaPredicted RBP9.08□□□□□ -0.96
RFFL-212ENST00000584655 AGFG2O95081 481 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 MT-ATP6P00846 226 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TPOP07202 933 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 RPA2P15927 270 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 AKR1C4P17516 323 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 IDH3GP51553 393 aaPredicted RBP9.08□□□□□ -0.96
RFFL-212ENST00000584655 GDPGP1Q6ZNW5 385 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 MFSD8Q8NHS3 518 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TRIB1Q96RU8 372 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 SLC19A3Q9BZV2 496 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 MED28Q9H204 178 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 PIGLQ9Y2B2 252 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 LHFPL6Q9Y693 200 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 PKD1L2Q7Z442 2459 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 ISPDA4D126 451 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TOX3O15405 576 aaPredicted RBP9.08□□□□□ -0.96
RFFL-212ENST00000584655 CBR3O75828 277 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 CD3DP04234 171 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 YES1P07947 543 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 IFITM2Q01629 132 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TAF9Q16594 264 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 SNAI3Q3KNW1 292 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 EXOSC6Q5RKV6 272 aaKnown RBP9.08□□□□□ -0.96
RFFL-212ENST00000584655 TMEM17Q86X19 198 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TMEM251Q8N6I4 163 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 TNFAIP8L1Q8WVP5 186 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 ZC3H10Q96K80 434 aaKnown RBP9.08□□□□□ -0.96
RFFL-212ENST00000584655 ABI3Q9P2A4 366 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 B3GALT5Q9Y2C3 310 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 IGLV3-12A0A075B6K2 115 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 MTNR1BP49286 362 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 SLC35A1P78382 337 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 RNFT1Q5M7Z0 435 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 PXKQ7Z7A4 578 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 DTX1Q86Y01 620 aa9.08□□□□□ -0.96
RFFL-212ENST00000584655 MISPQ8IVT2 679 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms