RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, human

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-223	ENST00000584472	ZNF254	O75437	659 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SOD3	P08294	240 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DBH	P09172	617 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CCL2	P13500	99 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	PAX1	P15863	534 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	MYL12A	P19105	171 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CALCR	P30988	508 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	OTX1	P32242	354 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	GDI2	P50395	445 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ETV1	P50549	477 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CHN2	P52757	468 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	GRB2	P62993	217 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	TAF13	Q15543	124 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	TBC1D28	Q2M2D7	210 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	AGAP6	Q5VW22	663 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	NUP37	Q8NFH4	326 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	OR1J2	Q8NGS2	313 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SNX33	Q8WV41	574 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ELOVL3	Q9HB03	270 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CLEC2D	Q9UHP7	191 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	MRM2	Q9UI43	246 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	IKZF2	Q9UKS7	526 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	LAMP3	Q9UQV4	416 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	LRP12	Q9Y561	859 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	USF3	Q68DE3	2245 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	C5orf49	A4QMS7	147 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	TRIM64	A6NGJ6	449 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	METTL15	A6NJ78	407 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472		F5H5K5	113 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	RGS10	O43665	173 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	SULT1C4	O75897	302 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ABHD16A	O95870	558 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	KRT8	P05787	483 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ZNF35	P13682	527 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CCNO	P22674	350 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	EEF1B2	P24534	225 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	HSD11B1	P28845	292 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	DCTD	P32321	178 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	TTK	P33981	857 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	FABP6	P51161	128 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ACTA2	P62736	377 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ACTG2	P63267	376 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	GALK2	Q01415	458 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	KCTD21	Q4G0X4	260 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	RNLS	Q5VYX0	342 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	PLEKHG7	Q6ZR37	379 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	PRSS48	Q7RTY5	328 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	BIVM	Q86UB2	503 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	KRTAP1-3	Q8IUG1	177 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	FBXL14	Q8N1E6	418 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	SPTSSA	Q969W0	71 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	MRPL48	Q96GC5	212 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	DCLRE1C	Q96SD1	692 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	MYCBP	Q99417	103 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CDCA4	Q9BXL8	241 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	GSX2	Q9BZM3	304 aa		13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ZNF701	Q9NV72	531 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CHCHD3	Q9NX63	227 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-223	ENST00000584472		M0R135	149 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	OVOL3	O00110	214 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CD8A	P01732	235 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	MT-ND2	P03891	347 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	HTR1A	P08908	422 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ACSM4	P0C7M7	580 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	APOBEC3A	P31941	199 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	PRKX	P51817	358 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	RIDA	P52758	137 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	OR12D2	P58182	307 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	NKX6-1	P78426	367 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	HGFAC	Q04756	655 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	IRF3	Q14653	427 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	TP53I3	Q53FA7	332 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	KCTD20	Q7Z5Y7	419 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	EGFL6	Q8IUX8	553 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	SYS1	Q8N2H4	156 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	MUC15	Q8N387	334 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ZNF799	Q96GE5	643 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	C4orf36	Q96KX1	117 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CCDC90B	Q9GZT6	254 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ZNF442	Q9H7R0	627 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	NIPAL2	Q9H841	368 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ISG20L2	Q9H9L3	353 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CDH20	Q9HBT6	801 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CA10	Q9NS85	328 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CAB39	Q9Y376	341 aa	Predicted RBP	13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	SPEF1	Q9Y4P9	236 aa		13.76	□□□□□ -0.21
CSNK1D-223	ENST00000584472	TMEM129	A0AVI4	362 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472		J3QLW9	94 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ICMT	O60725	284 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	MRPS14	O60783	128 aa	Known RBP	13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	TNFAIP8	O95379	198 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	APOC1	P02654	83 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	TACSTD2	P09758	323 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	ZNF19	P17023	458 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	WNT5A	P41221	380 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CX3CR1	P49238	355 aa		13.75	□□□□□ -0.21
CSNK1D-223	ENST00000584472	CDH15	P55291	814 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms