RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 OSMP13725 252 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 ANXA8P13928 327 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 ANPEPP15144 967 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 SELEP16581 610 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 PAICSP22234 425 aaKnown RBP17.28■□□□□ 0.36
SS18-224ENST00000584083 ACSM5Q6NUN0 579 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 ZNF771Q7L3S4 317 aaPredicted RBP17.28■□□□□ 0.36
SS18-224ENST00000584083 OR51F2Q8NH61 342 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 TMEM186Q96B77 213 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 OR2V2Q96R30 315 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 MDFIQ99750 246 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 GAL3ST1Q99999 423 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 COPS4Q9BT78 406 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 DDX28Q9NUL7 540 aaKnown RBP17.28■□□□□ 0.36
SS18-224ENST00000584083 HIF1ANQ9NWT6 349 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 PPP1R3CQ9UQK1 317 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 IQCF6A8MYZ5 107 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 DEAF1O75398 565 aaPredicted RBP17.27■□□□□ 0.36
SS18-224ENST00000584083 TIPRLO75663 272 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 SRP14P37108 136 aaKnown RBP17.27■□□□□ 0.36
SS18-224ENST00000584083 PRSS12P56730 875 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 HNRNPA0Q13151 305 aaKnown RBP17.27■□□□□ 0.36
SS18-224ENST00000584083 GK2Q14410 553 aaPredicted RBP17.27■□□□□ 0.36
SS18-224ENST00000584083 TEX30Q5JUR7 227 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 MRPL21Q7Z2W9 205 aaKnown RBP17.27■□□□□ 0.36
SS18-224ENST00000584083 OR10AD1Q8NGE0 317 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 SLAMF6Q96DU3 332 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 OR51V1Q9H2C8 321 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 TMEM106BQ9NUM4 274 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 TMEM100Q9NV29 134 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 DCAF16Q9NXF7 216 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 NPTNQ9Y639 398 aa17.27■□□□□ 0.36
SS18-224ENST00000584083 HMGN1P05114 100 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 SBK2P0C263 348 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 GSTT1P30711 240 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 PRKXP51817 358 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 PCK2Q16822 640 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 LINC01590Q5TEZ4 76 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 SHQ1Q6PI26 577 aaKnown RBP17.26■□□□□ 0.35
SS18-224ENST00000584083 DRAM2Q6UX65 266 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 PGAP1Q75T13 922 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 SPATC1Q76KD6 591 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 ERI1Q8IV48 349 aaKnown RBP17.26■□□□□ 0.35
SS18-224ENST00000584083 ZNF283Q8N7M2 679 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 OR6N2Q8NGY6 317 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 INTS14Q96SY0 518 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 SLC30A2Q9BRI3 323 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 UBAP1Q9NZ09 502 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 KIF17Q9P2E2 1029 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 N6AMT1Q9Y5N5 214 aa17.26■□□□□ 0.35
SS18-224ENST00000584083 ATRQ13535 2644 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 TRAV20A0A0B4J274 112 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 ZNF878C9JN71 531 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 PRR23D1E9PI22 279 aaPredicted RBP17.25■□□□□ 0.35
SS18-224ENST00000584083 H0YL77 283 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 GLCEO94923 617 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 IGHV2-5P01817 119 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 PRR23D2P0DMB1 279 aaPredicted RBP17.25■□□□□ 0.35
SS18-224ENST00000584083 RBMXP38159 391 aaKnown RBP17.25■□□□□ 0.35
SS18-224ENST00000584083 SRP9P49458 86 aaKnown RBP17.25■□□□□ 0.35
SS18-224ENST00000584083 EIF2B1Q14232 305 aaKnown RBP17.25■□□□□ 0.35
SS18-224ENST00000584083 SNAI3Q3KNW1 292 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 PLBD1Q6P4A8 553 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 SPRYD4Q8WW59 207 aaPredicted RBP17.25■□□□□ 0.35
SS18-224ENST00000584083 NRBF2Q96F24 287 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 PLEKHA8Q96JA3 519 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 KCNJ15Q99712 375 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 TEX12Q9BXU0 123 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 NTN4Q9HB63 628 aa17.25■□□□□ 0.35
SS18-224ENST00000584083 OTX1P32242 354 aaPredicted RBP17.24■□□□□ 0.35
SS18-224ENST00000584083 SLC15A1P46059 708 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 CDK5Q00535 292 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 C1orf146Q5VVC0 180 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 DPY19L4Q7Z388 723 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 ST7LQ8TDW4 575 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 MEGF10Q96KG7 1140 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 MMADHCQ9H3L0 296 aaPredicted RBP17.24■□□□□ 0.35
SS18-224ENST00000584083 PCDHB10Q9UN67 800 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 WNK2Q9Y3S1 2297 aa17.24■□□□□ 0.35
SS18-224ENST00000584083 IGHV3-64DA0A0J9YX35 117 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 F5H5P2 479 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 MLNRO43193 412 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 PLPP2O43688 288 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 HLA-DPB1P04440 258 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 SLC2A1P11166 492 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 KLHL12Q53G59 568 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 TMEM236Q5W0B7 351 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 FAHD2BQ6P2I3 314 aaPredicted RBP17.23■□□□□ 0.35
SS18-224ENST00000584083 OR2AE1Q8NHA4 323 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 DNAJC9Q8WXX5 260 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 UTP4Q969X6 686 aaKnown RBP17.23■□□□□ 0.35
SS18-224ENST00000584083 ZMYND19Q96E35 227 aaPredicted RBP17.23■□□□□ 0.35
SS18-224ENST00000584083 FAHD2AQ96GK7 314 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 GCM1Q9NP62 436 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 PAPOLBQ9NRJ5 636 aaKnown RBP17.23■□□□□ 0.35
SS18-224ENST00000584083 ARHGAP32A7KAX9 2087 aa17.23■□□□□ 0.35
SS18-224ENST00000584083 GGT3PA6NGU5 568 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 IFNL4K9M1U5 179 aa17.22■□□□□ 0.35
SS18-224ENST00000584083 PHF1O43189 567 aaPredicted RBP17.22■□□□□ 0.35
SS18-224ENST00000584083 IGHV2-70P01814 119 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms