RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 SLC25A1P53007 311 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 SLC27A4Q6P1M0 643 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 DCXRQ7Z4W1 244 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 IQCF1Q8N6M8 205 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 SPTSSAQ969W0 71 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 ZNF799Q96GE5 643 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 MEGF10Q96KG7 1140 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 SIGLEC11Q96RL6 698 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 DDX28Q9NUL7 540 aaKnown RBP18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 METRNQ9UJH8 293 aa18.08■□□□□ 0.48
PPP4R1-228ENST00000584074 IGHV3-64DA0A0J9YX35 117 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 RIIAD1A6NNX1 92 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 F5H5P2 479 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 IFNGP01579 166 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 SPARCP09486 303 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 ANOS1P23352 680 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 MMP16P51512 607 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 LCN2P80188 198 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 MALLQ13021 153 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 GK3PQ14409 553 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 ZMYND11Q15326 602 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 DNAL1Q4LDG9 190 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 SHQ1Q6PI26 577 aaKnown RBP18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 RFLNBQ8N5W9 214 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 OR6K6Q8NGW6 343 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 TEX47Q8TBZ9 253 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 SLCO4A1Q96BD0 722 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 SLC7A6OSQ96CW6 309 aaPredicted RBP18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 MED20Q9H944 212 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 TANC2Q9HCD6 1990 aa18.07■□□□□ 0.48
PPP4R1-228ENST00000584074 LOC105371242A0A075B767 164 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 A0A0G2JMP0 313 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 A0A0X1KG70 313 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 C5orf63A6NC05 138 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 H3BN98 237 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 TMEM178BH3BS89 294 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 ZNF593O00488 134 aaPredicted RBP18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 GNGT2O14610 69 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 HLA-DPB1P04440 258 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 SELEP16581 610 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 ZNF3P17036 446 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 SLC6A9P48067 706 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 ENTPD1P49961 510 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 BTG1P62324 171 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 FLOT2Q14254 428 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 PCK2Q16822 640 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 SNAI3Q3KNW1 292 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 PGAP1Q75T13 922 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 SPATA24Q86W54 205 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 LRRC28Q86X40 367 aaPredicted RBP18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 OR4M2Q8NGB6 313 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 ZNF420Q8TAQ5 688 aaPredicted RBP18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 ST7LQ8TDW4 575 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 C19orf24Q9BVV8 132 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 TMPRSS13Q9BYE2 586 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 CMC2Q9NRP2 79 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 TMEM100Q9NV29 134 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 PDP1Q9P0J1 537 aaPredicted RBP18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 PCDHB10Q9UN67 800 aa18.06■□□□□ 0.48
PPP4R1-228ENST00000584074 A0A1B0GWJ7 208 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 ARRDC5A6NEK1 342 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 FAM183AA6NL82 134 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 TCF21O43680 179 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 ZFP36P26651 326 aaKnown RBP18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 OTX1P32242 354 aaPredicted RBP18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 SRP9P49458 86 aaKnown RBP18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 LINC01590Q5TEZ4 76 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 DCAF12L2Q5VW00 463 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 LIPNQ5VXI9 398 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 HS3ST5Q8IZT8 346 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 KLHL36Q8N4N3 616 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 SLAMF6Q96DU3 332 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 COPS4Q9BT78 406 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 CENPMQ9NSP4 180 aa18.05■□□□□ 0.48
PPP4R1-228ENST00000584074 ZNF205O95201 554 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 CYB5R3P00387 301 aaPredicted RBP18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 POU1F1P28069 291 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 GRK5P34947 590 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 ZNF92Q03936 586 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 TMEM155Q4W5P6 130 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 TEX30Q5JUR7 227 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 SPATC1Q76KD6 591 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 MRPL21Q7Z2W9 205 aaKnown RBP18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 MOGAT3Q86VF5 341 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 SPICQ8N5J4 248 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 OR2AE1Q8NHA4 323 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 SPRYD4Q8WW59 207 aaPredicted RBP18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 OTULINQ96BN8 352 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 OCEL1Q9H607 264 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 PATZ1Q9HBE1 687 aaKnown RBP18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 POMPQ9Y244 141 aa18.04■□□□□ 0.48
PPP4R1-228ENST00000584074 DYSFO75923 2080 aa18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 J3QLI3 93 aa18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 E2F6O75461 281 aa18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 SLC2A1P11166 492 aa18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 ADRA2CP18825 462 aa18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 PRKACGP22612 351 aa18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 PRKXP51817 358 aa18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 SEC61A1P61619 476 aaKnown RBP18.03■□□□□ 0.48
PPP4R1-228ENST00000584074 TAF13Q15543 124 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms