RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 RPUSD3Q6P087 351 aaKnown RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 ZNF813Q6ZN06 617 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 DOK3Q7L591 496 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 SYT9Q86SS6 491 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 WDFY1Q8IWB7 410 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 CCDC54Q8NEL0 328 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 IL17RDQ8NFM7 739 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ENKURQ8TC29 256 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ABHD3Q8WU67 409 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 RAB40AQ8WXH6 277 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 RGP1Q92546 391 aaPredicted RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 HTRA1Q92743 480 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 PPP1R14AQ96A00 147 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 SARAFQ96BY9 339 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 FGGYQ96C11 551 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ORAI1Q96D31 301 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 SNRNP40Q96DI7 357 aaKnown RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 FOXB1Q99853 325 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 WACQ9BTA9 647 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 LINC00470Q9BZP3 86 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 SLC22A4Q9H015 551 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 OR10A2Q9H208 303 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 ZCCHC4Q9H5U6 513 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 OCEL1Q9H607 264 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 GPR35Q9HC97 309 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 G6PC2Q9NQR9 355 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 DIABLOQ9NR28 239 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 FAIMQ9NVQ4 179 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 TMEM38BQ9NVV0 291 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 FAM206AQ9NX38 181 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 STEAP1Q9UHE8 339 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 NUFIP1Q9UHK0 495 aaKnown RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 FOXD3Q9UJU5 478 aaPredicted RBP8.18□□□□□ -1.1
SS18-220ENST00000582092 SLC5A6Q9Y289 635 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 V9GYH0 126 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 FREM3P0C091 2139 aa8.18□□□□□ -1.1
SS18-220ENST00000582092 MYO18BQ8IUG5 2567 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 IGKV3D-15A0A087WSY6 115 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 A0A0G2JK05 382 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 SLC22A20A6NK97 555 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 DOK2O60496 412 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 AGFG2O95081 481 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 CRYABP02511 175 aaKnown RBP8.17□□□□□ -1.1
SS18-220ENST00000582092 EIF4EP06730 217 aaKnown RBP8.17□□□□□ -1.1
SS18-220ENST00000582092 GSTT2BP0CG30 244 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 CPN1P15169 458 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 RAB3AP20336 220 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 IFITM3Q01628 133 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 PLP2Q04941 152 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 OXA1LQ15070 435 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 RAB35Q15286 201 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 SLC36A2Q495M3 483 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 PHYHD1Q5SRE7 291 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 HACD4Q5VWC8 232 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 TMEM53Q6P2H8 277 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 FOXL2NBQ6ZUU3 175 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 PGAP1Q75T13 922 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 LRRTM1Q86UE6 522 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 TUSC5Q8IXB3 177 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 SLC22A24Q8N4F4 322 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 JAGN1Q8N5M9 183 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 NKAIN3Q8N8D7 197 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 Q8NA96 180 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 OR4M1Q8NGD0 313 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 OR51A4Q8NGJ6 313 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 OR10AC1Q8NH08 325 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 FNDC9Q8TBE3 224 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 SYNPRQ8TBG9 265 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 OR51E1Q8TCB6 317 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 LGALS14Q8TCE9 139 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 ASB5Q8WWX0 329 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 RFT1Q96AA3 541 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 FAM71F1Q96KD3 344 aaPredicted RBP8.17□□□□□ -1.1
SS18-220ENST00000582092 ZFP3Q96NJ6 502 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 SORCS2Q96PQ0 1159 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 ALKBH3Q96Q83 286 aaPredicted RBP8.17□□□□□ -1.1
SS18-220ENST00000582092 RNF122Q9H9V4 155 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 LIN7BQ9HAP6 207 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 ZNF275Q9NSD4 429 aaPredicted RBP8.17□□□□□ -1.1
SS18-220ENST00000582092 ASF1BQ9NVP2 202 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 TAS2R4Q9NYW5 299 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 ZNF175Q9Y473 711 aa8.17□□□□□ -1.1
SS18-220ENST00000582092 TRAV8-7A0A075B6U6 113 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 A0A1W2PQ09 198 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 M0R135 149 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 SULT1B1O43704 296 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 SRSF10O75494 262 aaKnown RBP8.16□□□□□ -1.1
SS18-220ENST00000582092 UBL3O95164 117 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 ACSM4P0C7M7 580 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 B4GALT1P15291 398 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 FSTP19883 344 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 GNLYP22749 145 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 HTR2CP28335 458 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 BDKRB2P30411 391 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 THBS2P35442 1172 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 AP3S2P59780 193 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 SPOCK1Q08629 439 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 GTF3C1Q12789 2109 aa8.16□□□□□ -1.1
SS18-220ENST00000582092 ENDOGQ14249 297 aaKnown RBP8.16□□□□□ -1.1
SS18-220ENST00000582092 P2RY14Q15391 338 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms