RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HS3ST5Q8IZT8 346 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 ITLN1Q8WWA0 313 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 TMEM186Q96B77 213 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 SLCO4A1Q96BD0 722 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 OTULINQ96BN8 352 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 ZNF799Q96GE5 643 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 OR2V2Q96R30 315 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 MED20Q9H944 212 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 HIF1ANQ9NWT6 349 aa16.49■□□□□ 0.23
SREBF1-220ENST00000581707 ISPDA4D126 451 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 FAM183AA6NL82 134 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 IQCF6A8MYZ5 107 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 SLC6A9P48067 706 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 GINS1Q14691 196 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 ZNF283Q8N7M2 679 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 BHLHE23Q8NDY6 225 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 GAL3ST1Q99999 423 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 SLC30A2Q9BRI3 323 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 TMEM106BQ9NUM4 274 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 DCAF16Q9NXF7 216 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 PPP1R3CQ9UQK1 317 aa16.48■□□□□ 0.23
SREBF1-220ENST00000581707 DEAF1O75398 565 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-220ENST00000581707 ATP5HO75947 161 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 IGHV2-5P01817 119 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 OSMP13725 252 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 ANXA8P13928 327 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 THBS2P35442 1172 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 HNRNPA0Q13151 305 aaKnown RBP16.47■□□□□ 0.23
SREBF1-220ENST00000581707 GK2Q14410 553 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-220ENST00000581707 TAF13Q15543 124 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 LINC01590Q5TEZ4 76 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 DRAM2Q6UX65 266 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 OR10AD1Q8NGE0 317 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 SLAMF6Q96DU3 332 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 COPS4Q9BT78 406 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 CENPMQ9NSP4 180 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 TMEM100Q9NV29 134 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 NPTNQ9Y639 398 aa16.47■□□□□ 0.23
SREBF1-220ENST00000581707 WNK2Q9Y3S1 2297 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 TRAV20A0A0B4J274 112 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 H0YL77 283 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 HMGN1P05114 100 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 SBK2P0C263 348 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 PAICSP22234 425 aaKnown RBP16.46■□□□□ 0.23
SREBF1-220ENST00000581707 OTX1P32242 354 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-220ENST00000581707 SRP14P37108 136 aaKnown RBP16.46■□□□□ 0.23
SREBF1-220ENST00000581707 PRSS12P56730 875 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 PGAP1Q75T13 922 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 ZNF771Q7L3S4 317 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-220ENST00000581707 NTN4Q9HB63 628 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 UBAP1Q9NZ09 502 aa16.46■□□□□ 0.23
SREBF1-220ENST00000581707 MLNRO43193 412 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 PLPP2O43688 288 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 TIPRLO75663 272 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 GLCEO94923 617 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 IGHV2-70P01814 119 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 GSTT1P30711 240 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 RBMXP38159 391 aaKnown RBP16.45■□□□□ 0.22
SREBF1-220ENST00000581707 SRP9P49458 86 aaKnown RBP16.45■□□□□ 0.22
SREBF1-220ENST00000581707 PRKXP51817 358 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 CDK5Q00535 292 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 EIF2B1Q14232 305 aaKnown RBP16.45■□□□□ 0.22
SREBF1-220ENST00000581707 SNAI3Q3KNW1 292 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 SHQ1Q6PI26 577 aaKnown RBP16.45■□□□□ 0.22
SREBF1-220ENST00000581707 CXXC5Q7LFL8 322 aaKnown RBP16.45■□□□□ 0.22
SREBF1-220ENST00000581707 MRPL21Q7Z2W9 205 aaKnown RBP16.45■□□□□ 0.22
SREBF1-220ENST00000581707 ERI1Q8IV48 349 aaKnown RBP16.45■□□□□ 0.22
SREBF1-220ENST00000581707 OR6N2Q8NGY6 317 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 ST7LQ8TDW4 575 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 NRBF2Q96F24 287 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 MEGF10Q96KG7 1140 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 INTS14Q96SY0 518 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 KCNJ15Q99712 375 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 OR51V1Q9H2C8 321 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 GCM1Q9NP62 436 aa16.45■□□□□ 0.22
SREBF1-220ENST00000581707 A0A1B0GWJ7 208 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 ZNF878C9JN71 531 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 PRR23D1E9PI22 279 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-220ENST00000581707 F5H5P2 479 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 IFNL4K9M1U5 179 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 PHF1O43189 567 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-220ENST00000581707 PRR23D2P0DMB1 279 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-220ENST00000581707 SLC15A1P46059 708 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 ZNF92Q03936 586 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 FAHD2BQ6P2I3 314 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-220ENST00000581707 PLBD1Q6P4A8 553 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 SPATC1Q76KD6 591 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 DPY19L4Q7Z388 723 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 SPRYD4Q8WW59 207 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-220ENST00000581707 UTP4Q969X6 686 aaKnown RBP16.44■□□□□ 0.22
SREBF1-220ENST00000581707 FAHD2AQ96GK7 314 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 SIGLEC11Q96RL6 698 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 MMADHCQ9H3L0 296 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-220ENST00000581707 PCDHB10Q9UN67 800 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 N6AMT1Q9Y5N5 214 aa16.44■□□□□ 0.22
SREBF1-220ENST00000581707 RNF212BA8MTL3 300 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 TMEM178BH3BS89 294 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 HLA-DPB1P04440 258 aa16.43■□□□□ 0.22
SREBF1-220ENST00000581707 GRB2P62993 217 aaKnown RBP16.43■□□□□ 0.22
SREBF1-220ENST00000581707 SHFQ7M4L6 423 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms