RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 A0A0J9YXV3 536 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 A6NDN8 102 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 DNASE2O00115 360 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 PLPP1O14494 284 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 BET1O15155 118 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 SEMA3DO95025 777 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 HPRT1P00492 218 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 OR8U9P0C7N5 309 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF806P0C7X5 589 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 CD37P11049 281 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 USF1P22415 310 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 TNFSF9P41273 254 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 SYNJ2BPP57105 145 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 RPS15AP62244 130 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 GCSAMLQ5JQS6 135 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 CDKL3Q8IVW4 592 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 ARRDC1Q8N5I2 433 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 C8orf31Q8N9H6 132 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 RGP1Q92546 391 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 SLIRPQ9GZT3 109 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 MYOZ1Q9NP98 299 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 MED4Q9NPJ6 270 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 DDX18Q9NVP1 670 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 SLC17A7Q9P2U7 560 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF835Q9Y2P0 537 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 RFNGQ9Y644 331 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 SAR1BQ9Y6B6 198 aa2.73□□□□□ -1.97
SMCHD1-205ENST00000581383 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 IGHV1OR15-9A0A0B4J2B8 117 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 IGKV1-8A0A0C4DH67 115 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 C5orf63A6NC05 138 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 BPY2O14599 106 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 NMT2O60551 498 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 REM1O75628 298 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 HLA-DQA1P01909 254 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 KRT16P08779 473 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 LINC00869P0C866 280 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 TCP1P17987 556 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 SLC11A1P49279 550 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 CDK5Q00535 292 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 RAD51Q06609 339 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 MOBPQ13875 183 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 NCF4Q15080 339 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 FHOD3Q2V2M9 1422 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 MPV17L2Q567V2 206 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 BEX5Q5H9J7 111 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 ANGPTL8Q6UXH0 198 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 SLC16A13Q7RTY0 426 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF547Q8IVP9 402 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 CSGALNACT2Q8N6G5 542 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 OR6N1Q8NGY5 312 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 OR51F2Q8NH61 342 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF461Q8TAF7 563 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 CA5BP1Q8WTZ4 195 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 PEX13Q92968 403 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 JSRP1Q96MG2 331 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 SPIN2AQ99865 258 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 SPIN2BQ9BPZ2 258 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 UQCC2Q9BRT2 126 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 FGF23Q9GZV9 251 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 TMEM27Q9HBJ8 222 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 DOCK8Q8NF50 2099 aa2.72□□□□□ -1.97
SMCHD1-205ENST00000581383 PCDH11XQ9BZA7 1347 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 C7orf66A4D0T2 115 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 GABRR3A8MPY1 467 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 CCNKO75909 580 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF286BP0CG31 522 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 STAG3L3P0CL85 134 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 PGA4P0DJD7 388 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 PGA3P0DJD8 388 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 PGA5P0DJD9 388 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 PMELP40967 661 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 OPRK1P41145 380 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 TAS2R46P59540 309 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 RPL23P62829 140 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 CACNG7P62955 275 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 CYP24A1Q07973 514 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 RBMY1FQ15415 496 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 ADNP2Q6IQ32 1131 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 TMCO2Q7Z6W1 182 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 HORMAD1Q86X24 394 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 VKORC1L1Q8N0U8 176 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 ZNF709Q8N972 641 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 RPEQ96AT9 228 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 L3HYPDHQ96EM0 354 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 OR10C1Q96KK4 312 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 CALN1Q9BXU9 219 aa2.71□□□□□ -1.98
SMCHD1-205ENST00000581383 MROH7Q68CQ1 1323 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 IGHV1-69DA0A0B4J2H0 117 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 A0A1W2PRD5 423 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 TMEM120BA0PK00 339 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 SOCS1O15524 211 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 AKR7A2O43488 359 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 SLC22A5O76082 557 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 C1GALT1C1LP0DN25 315 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 GABRG2P18507 467 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 MAGEA1P43355 309 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 NDUFA8P51970 172 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 GABRA6Q16445 453 aa2.7□□□□□ -1.98
SMCHD1-205ENST00000581383 PLCXD3Q63HM9 321 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms